RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NIPA1Q7RTP0 329 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 FMNL3Q8IVF7 1028 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 TEKT3Q9BXF9 490 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 EXOC1Q9NV70 894 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 CPSF2Q9P2I0 782 aaKnown RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.47□□□□□ -0.57
HERC4-207ENST00000460168 UBIAD1Q9Y5Z9 338 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 E9PMD0 336 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 DDX39AO00148 427 aaKnown RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 CCND2P30279 289 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 MAGEA9P43362 315 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 PDE4DQ08499 809 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 MOGSQ13724 837 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 SARM1Q6SZW1 724 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 SRLQ86TD4 932 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 EFCAB13Q8IY85 973 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 KIF18AQ8NI77 898 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 RIT2Q99578 217 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 EIF2AK1Q9BQI3 630 aaKnown RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 JADE2Q9NQC1 790 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 MYMKA6NI61 221 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 EML1O00423 815 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 KLRC4O43908 158 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 RHOBTB3O94955 611 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 NR3C2P08235 984 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 CCDC15Q0P6D6 951 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 XRRA1Q6P2D8 792 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
HERC4-207ENST00000460168 ENOX1Q8TC92 643 aaKnown RBP11.46□□□□□ -0.57
HERC4-207ENST00000460168 DDX12PQ92771 950 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 MIEF2Q96C03 454 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
HERC4-207ENST00000460168 RGL1Q9NZL6 768 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 DNM3Q9UQ16 869 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 MAPK8IP1Q9UQF2 711 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 GDAQ9Y2T3 454 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 NFE2L3Q9Y4A8 694 aa11.46□□□□□ -0.57
HERC4-207ENST00000460168 PFASO15067 1338 aa11.46□□□□□ -0.58
HERC4-207ENST00000460168 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 PLA2G4BP0C869 781 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 SPATA31C1P0DKV0 1188 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 IDEP14735 1019 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 ZNF75DP51815 510 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 GTF2A2P52657 109 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 PSMD2Q13200 908 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 STIM1Q13586 685 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 TMCO4Q5TGY1 634 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 GPAT2Q6NUI2 795 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 POLR3CQ9BUI4 534 aaPredicted RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 UNC45AQ9H3U1 944 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 AGO4Q9HCK5 861 aaKnown RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 KIF4AO95239 1232 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 CETPP11597 493 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 STX17P56962 302 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 CNNM4Q6P4Q7 775 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 TPH2Q8IWU9 490 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 RBM12BQ8IXT5 1001 aaKnown RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 SPC24Q8NBT2 197 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 THOC1Q96FV9 657 aaKnown RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 IQCGQ9H095 443 aaKnown RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 UTP6Q9NYH9 597 aaKnown RBP11.45□□□□□ -0.58
HERC4-207ENST00000460168 TCEAL9Q9UHQ7 104 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 SAMM50Q9Y512 469 aa11.45□□□□□ -0.58
HERC4-207ENST00000460168 CCL15-CCL14A0A0B4J2E2 113 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 SLC25A27O95847 323 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 KRT18P05783 430 aaKnown RBP11.44□□□□□ -0.58
HERC4-207ENST00000460168 CYP2C8P10632 490 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 ATP1A3P13637 1013 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 PRCPP42785 496 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 RPS6KA3P51812 740 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 PSMC1P62191 440 aaKnown RBP11.44□□□□□ -0.58
HERC4-207ENST00000460168 PSMC6P62333 389 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 PAK1Q13153 545 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 CTTNQ14247 550 aaKnown RBP11.44□□□□□ -0.58
HERC4-207ENST00000460168 CCL15Q16663 113 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 TPD52L1Q16890 204 aaPredicted RBP11.44□□□□□ -0.58
HERC4-207ENST00000460168 UNC13DQ70J99 1090 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 NLRX1Q86UT6 975 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 GPBP1Q86WP2 473 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 GIMAP8Q8ND71 665 aaPredicted RBP11.44□□□□□ -0.58
HERC4-207ENST00000460168 DNERQ8NFT8 737 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 DYDC2Q96IM9 177 aa11.44□□□□□ -0.58
HERC4-207ENST00000460168 HSD17B14Q9BPX1 270 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms