RNA–Protein interactions for RNA: ENST00000458716.2

ZFHX4-201, Transcript of zinc finger homeobox 4, humanhuman

TSL 2

Gene ZFHX4, Length 3,612 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-201ENST00000458716 GKAP1Q5VSY0 366 aaPredicted RBP9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 IRF2BP2Q7Z5L9 587 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 SYN2Q92777 582 aaPredicted RBP9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 HAS1Q92839 578 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 IKZF4Q9H2S9 585 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 AIPL1Q9NZN9 384 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 BAIAP2L1Q9UHR4 511 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 SUFUQ9UMX1 484 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 MYH4Q9Y623 1939 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 ATXN2Q99700 1313 aaKnown RBP9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 POTEFA5A3E0 1075 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 CAND2O75155 1236 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 GFPT2O94808 682 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 SHBGP04278 402 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 DDR1Q08345 913 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 NEDD9Q14511 834 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 TMEM119Q4V9L6 283 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 POTEEQ6S8J3 1075 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 LRIG3Q6UXM1 1119 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 FAM228AQ86W67 206 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 GLG1Q92896 1179 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 HVCN1Q96D96 273 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 PBKQ96KB5 322 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 PCDHB13Q9Y5F0 798 aa9.44□□□□□ -0.9
ZFHX4-201ENST00000458716 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 H2AFZP0C0S5 128 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 SLURP2P0DP57 97 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 SLCO1A2P46721 670 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 IFNAR2P48551 515 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 BYSLQ13895 437 aaKnown RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 LLGL1Q15334 1064 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PPP1R7Q15435 360 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 DDB1Q16531 1140 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 EXOC3L4Q17RC7 722 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 HIBCHQ6NVY1 386 aaPredicted RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 H2AFVQ71UI9 128 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 TMC3Q7Z5M5 1100 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 MARCH10Q8NA82 808 aaPredicted RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 ARMCX3Q9UH62 379 aaPredicted RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 GOLGB1Q14789 3259 aaKnown RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 HGSO14964 777 aaPredicted RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 CASP4P49662 377 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PLTPP55058 493 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 EMC10Q5UCC4 262 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 LRRC57Q8N9N7 239 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PSMD1Q99460 953 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PAGR1Q9BTK6 254 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 LRRC27Q9C0I9 530 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 BCS1LQ9Y276 419 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 SNX24Q9Y343 169 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 UTP11Q9Y3A2 253 aaKnown RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 SFI1A8K8P3 1242 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 F8VZ95 297 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 BIRC3Q13489 604 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PDIA5Q14554 519 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 UBAP2Q5T6F2 1119 aaKnown RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 AADACL2Q6P093 401 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 CCDC26Q8TAB7 109 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 ACTRT1Q8TDG2 376 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 TCP11Q8WWU5 503 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 CEP63Q96MT8 703 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
ZFHX4-201ENST00000458716 PON1P27169 355 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 ELF1P32519 619 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 PSMC6P62333 389 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 NFIXQ14938 502 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 NBPF9Q3BBW0 867 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 PREPLQ4J6C6 727 aaPredicted RBP9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 FAM133BQ5BKY9 247 aaKnown RBP9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 KCTD10Q9H3F6 313 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 RTCBQ9Y3I0 505 aaKnown RBP9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 TMEM110-MUSTN1A8MSY1 372 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 FLOT1O75955 427 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 GNA14O95837 355 aa9.42□□□□□ -0.9
ZFHX4-201ENST00000458716 CLTAP09496 248 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms