RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SLC26A2P50443 739 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 ACTR2P61160 394 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 IGBP1P78318 339 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 NHLH1Q02575 133 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 COASYQ13057 564 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 PAK2Q13177 524 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 COL9A3Q14050 684 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-227ENST00000458564 PLCB4Q15147 1175 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 CLUL1Q15846 466 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 HFE2Q6ZVN8 426 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 ALYREFQ86V81 257 aaKnown RBP11.93□□□□□ -0.5
HDLBP-227ENST00000458564 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
HDLBP-227ENST00000458564 NME8Q8N427 588 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 FANCBQ8NB91 859 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 ZBTB10Q96DT7 871 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 MXRA8Q9BRK3 442 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
HDLBP-227ENST00000458564 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
HDLBP-227ENST00000458564 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 SLC12A7Q9Y666 1083 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 TECTAO75443 2155 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 IGKV6D-21A0A0A0MT36 114 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 STXBP3O00186 592 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 ATG7O95352 703 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 NDUFV1P49821 464 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 CEP55Q53EZ4 464 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 HEATR3Q7Z4Q2 680 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 KLHL23Q8NBE8 558 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 FBXL18Q96ME1 805 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 SDF4Q9BRK5 362 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 CLEC1BQ9P126 229 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 MUTYHQ9UIF7 546 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 KIAA1671Q9BY89 1806 aa11.92□□□□□ -0.5
HDLBP-227ENST00000458564 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 FSD2A1L4K1 749 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 SLC27A2O14975 620 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 GLP2RO95838 553 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 FOSP01100 380 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 SARSP49591 514 aaKnown RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 MRE11P49959 708 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 STAT5BP51692 787 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 KRT76Q01546 638 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 UBE3AQ05086 875 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 TMEM62Q0P6H9 643 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 CBX2Q14781 532 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 BMP8AQ7Z5Y6 402 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 ADGRD2Q7Z7M1 963 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 MICU3Q86XE3 530 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 CYP2W1Q8TAV3 490 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 TRAPPC12Q8WVT3 735 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 POF1BQ8WVV4 589 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 EDAQ92838 391 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 IGFLR1Q9H665 355 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 AGO4Q9HCK5 861 aaKnown RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 RIC8AQ9NPQ8 531 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-227ENST00000458564 USP34Q70CQ2 3546 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 COL1A2P08123 1366 aa11.91□□□□□ -0.5
HDLBP-227ENST00000458564 LOC730098B7Z3J9 87 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 MEIS1O00470 390 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 HBP1O60381 514 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 ARP10275 920 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 SREBF1P36956 1147 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 FUT2Q10981 343 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 AP3B2Q13367 1082 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 NECTIN1Q15223 517 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 PAN2Q504Q3 1202 aaKnown RBP11.9□□□□□ -0.5
HDLBP-227ENST00000458564 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 ATP8B4Q8TF62 1192 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 ANO3Q9BYT9 981 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 C1orf112Q9NSG2 853 aa11.9□□□□□ -0.5
HDLBP-227ENST00000458564 RBM28Q9NW13 759 aaKnown RBP11.9□□□□□ -0.5
HDLBP-227ENST00000458564 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.51
HDLBP-227ENST00000458564 MGEA5O60502 916 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 CSPG5O95196 566 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 CCNE2O96020 404 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 NRIP1P48552 1158 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
HDLBP-227ENST00000458564 GATMP50440 423 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 NAPAP54920 295 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 PKN1Q16512 942 aa11.89□□□□□ -0.51
HDLBP-227ENST00000458564 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms