RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 AGO3Q9H9G7 860 aaKnown RBP24.56■■□□□ 1.52
CPNE1-220ENST00000458038 C11orf16Q9NQ32 467 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 RNF216Q9NWF9 866 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-220ENST00000458038 V9GY48 417 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-220ENST00000458038 KDM3AQ9Y4C1 1321 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 POTEB3A0JP26 581 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 PRR33A8MZF0 331 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 GRM6O15303 877 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 SREBF1P36956 1147 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 FUT2Q10981 343 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 KRT32Q14532 448 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 POTEBQ6S5H4 581 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 CMTR2Q8IYT2 770 aaKnown RBP24.55■■□□□ 1.52
CPNE1-220ENST00000458038 CRIPAKQ8N1N5 446 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 CYP2W1Q8TAV3 490 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 PPP2R3CQ969Q6 453 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 ANO3Q9BYT9 981 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 CELF4Q9BZC1 486 aaKnown RBP24.55■■□□□ 1.52
CPNE1-220ENST00000458038 AGO4Q9HCK5 861 aaKnown RBP24.55■■□□□ 1.52
CPNE1-220ENST00000458038 BARHL2Q9NY43 387 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 PADI3Q9ULW8 664 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 IGSF9BQ9UPX0 1349 aa24.55■■□□□ 1.52
CPNE1-220ENST00000458038 SMCO2A6NFE2 343 aa24.54■■□□□ 1.52
CPNE1-220ENST00000458038 MMP1P03956 469 aa24.54■■□□□ 1.52
CPNE1-220ENST00000458038 ARP10275 920 aa24.54■■□□□ 1.52
CPNE1-220ENST00000458038 MCTP2Q6DN12 878 aa24.54■■□□□ 1.52
CPNE1-220ENST00000458038 MUC6Q6W4X9 2439 aa24.54■■□□□ 1.52
CPNE1-220ENST00000458038 PIEZO1Q92508 2521 aa24.54■■□□□ 1.52
CPNE1-220ENST00000458038 ATG2AQ2TAZ0 1938 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 IGKV6D-21A0A0A0MT36 114 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 STXBP3O00186 592 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 HBP1O60381 514 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 HMGB1P09429 215 aaKnown RBP24.53■■□□□ 1.52
CPNE1-220ENST00000458038 ZNF76P36508 570 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 PAK2Q13177 524 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 ODR4Q5SWX8 454 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 FAM160B1Q5W0V3 765 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 TYW1BQ6NUM6 668 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 RTN4RL1Q86UN2 441 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-220ENST00000458038 UPF3BQ9BZI7 483 aaKnown RBP24.53■■□□□ 1.52
CPNE1-220ENST00000458038 PLAGL2Q9UPG8 496 aa24.53■■□□□ 1.52
CPNE1-220ENST00000458038 C5orf42Q9H799 3197 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 EVPLQ92817 2033 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 SCG2P13521 617 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 LTBRP36941 435 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 KRT76Q01546 638 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 ITGB3BPQ13352 177 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-220ENST00000458038 MTHFD1LQ6UB35 978 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 ADHFE1Q8IWW8 467 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 LINC01599Q8WXQ3 324 aa24.52■■□□□ 1.52
CPNE1-220ENST00000458038 MYH9P35579 1960 aaKnown RBP24.52■■□□□ 1.52
CPNE1-220ENST00000458038 CCDC196A0A1B0GTZ2 297 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 C19orf67A6NJJ6 358 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 CLK2P49760 499 aaKnown RBP24.51■■□□□ 1.51
CPNE1-220ENST00000458038 ZP2Q05996 745 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 HYAL1Q12794 435 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 ABHD15Q6UXT9 468 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 POP1Q99575 1024 aaKnown RBP24.51■■□□□ 1.51
CPNE1-220ENST00000458038 BRPF3Q9ULD4 1205 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 COL1A2P08123 1366 aa24.51■■□□□ 1.51
CPNE1-220ENST00000458038 FAM86C2PA6NEL3 165 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 GOLGA8AA7E2F4 631 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 GOLGA8BA8MQT2 603 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 BACH1O14867 736 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 DCXO43602 365 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 KLRC1P26715 233 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 TMEM62Q0P6H9 643 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 SMAD2Q15796 467 aaKnown RBP24.5■■□□□ 1.51
CPNE1-220ENST00000458038 ZNF484Q5JVG2 852 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 ATP8B4Q8TF62 1192 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 TRAPPC12Q8WVT3 735 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 ZBTB10Q96DT7 871 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 LRFN2Q9ULH4 789 aa24.5■■□□□ 1.51
CPNE1-220ENST00000458038 MRPL42Q9Y6G3 142 aaKnown RBP24.5■■□□□ 1.51
CPNE1-220ENST00000458038 TRIOO75962 3097 aa24.49■■□□□ 1.51
CPNE1-220ENST00000458038 CYP3A4P08684 503 aa24.49■■□□□ 1.51
CPNE1-220ENST00000458038 CSPP1Q1MSJ5 1256 aa24.49■■□□□ 1.51
CPNE1-220ENST00000458038 PGBD1Q96JS3 809 aa24.49■■□□□ 1.51
CPNE1-220ENST00000458038 KLF18A0A0U1RQI7 1052 aa24.48■■□□□ 1.51
CPNE1-220ENST00000458038 HOXD11P31277 338 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-220ENST00000458038 ADAM15Q13444 863 aa24.48■■□□□ 1.51
CPNE1-220ENST00000458038 MIS18BP1Q6P0N0 1132 aa24.48■■□□□ 1.51
CPNE1-220ENST00000458038 PLA2G4DQ86XP0 818 aa24.48■■□□□ 1.51
CPNE1-220ENST00000458038 SPPL3Q8TCT6 385 aa24.48■■□□□ 1.51
CPNE1-220ENST00000458038 CCDC12Q8WUD4 166 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-220ENST00000458038 ALG13Q9NP73 1137 aaKnown RBP24.48■■□□□ 1.51
CPNE1-220ENST00000458038 TBC1D22BQ9NU19 505 aa24.48■■□□□ 1.51
CPNE1-220ENST00000458038 ESYT2A0FGR8 921 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 IPO5O00410 1097 aaKnown RBP24.47■■□□□ 1.51
CPNE1-220ENST00000458038 CCNE2O96020 404 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 ITGB1P05556 798 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 SARSP49591 514 aaKnown RBP24.47■■□□□ 1.51
CPNE1-220ENST00000458038 FGD1P98174 961 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 SMAD4Q13485 552 aaKnown RBP24.47■■□□□ 1.51
CPNE1-220ENST00000458038 PFKFB3Q16875 520 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-220ENST00000458038 PDXDC2PQ6P474 469 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 ZNF302Q9NR11 478 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 C1orf112Q9NSG2 853 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 FAM217BQ9NTX9 383 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-220ENST00000458038 TMEM260Q9NX78 707 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms