RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 FRMD5Q7Z6J6 570 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 PPFIBP1Q86W92 1011 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 C12orf56Q8IXR9 622 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 DHX37Q8IY37 1157 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 MCPH1Q8NEM0 835 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 KIFAP3Q92845 792 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM167AQ96KS9 214 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ERGIC2Q96RQ1 377 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 LXNQ9BS40 222 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 TMX1Q9H3N1 280 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 TMEM206Q9H813 350 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC5A4Q9NY91 659 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 GDAQ9Y2T3 454 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 PLXNB2O15031 1838 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEFA5A3E0 1075 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 E9PMD0 336 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 EML1O00423 815 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 N4BP3O15049 544 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 KIAA0391O15091 583 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM13AO94988 1023 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 FCER1AP12319 257 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 IDEP14735 1019 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 CDK17Q00537 523 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 KCTD2Q14681 263 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 KRT31Q15323 416 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 KNOP1Q1ED39 458 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 TREML2Q5T2D2 321 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 KLHL10Q6JEL2 608 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEGQ6S5H5 508 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 TPH2Q8IWU9 490 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 REM2Q8IYK8 340 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 CYP2W1Q8TAV3 490 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 AFAP1L1Q8TED9 768 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 STAMQ92783 540 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 VTI1AQ96AJ9 217 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 DYDC2Q96IM9 177 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 HHIPL1Q96JK4 782 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 PARK7Q99497 189 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 DUSP9Q99956 384 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 BHMT2Q9H2M3 363 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 JPH1Q9HDC5 661 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 SAMSN1Q9NSI8 373 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 TYW1Q9NV66 732 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 RIPK3Q9Y572 518 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 IGKV6D-21A0A0A0MT36 114 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 CETN3O15182 167 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 ARHGAP6O43182 974 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 CNMDO75829 334 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 ATP1A3P13637 1013 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 ITGB3BPQ13352 177 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 XKR3Q5GH77 459 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM160B1Q5W0V3 765 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 TMC6Q7Z403 805 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 GPRC5AQ8NFJ5 357 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 SPIRE2Q8WWL2 714 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 JPH2Q9BR39 696 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 REEP2Q9BRK0 252 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 NTPCRQ9BSD7 190 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 SRRTQ9BXP5 876 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 BTBD7Q9P203 1132 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC9A2Q9UBY0 812 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 EXOC7Q9UPT5 735 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 CLEC11AQ9Y240 323 aa7.56□□□□□ -1.2
ECHDC1-210ENST00000454859 IGSF9BQ9UPX0 1349 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 GTPBP10A4D1E9 387 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 MANSC4A6NHS7 340 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 AKR1B15C9JRZ8 316 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 DGAT1O75907 488 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 PTGS1P23219 599 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 RFC5P40937 340 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ERVK-9P63128 1117 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ERVK-24P63145 666 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ANKRD40Q6AI12 368 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 IRF2BP1Q8IU81 584 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 IL31RAQ8NI17 732 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 MS4A4AQ96JQ5 239 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 CCDC43Q96MW1 224 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 PLIN2Q99541 437 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 TUBGCP2Q9BSJ2 902 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 STRA6Q9BX79 667 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 NIFKQ9BYG3 293 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 KCTD10Q9H3F6 313 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 HOMER2Q9NSB8 354 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ZNHIT6Q9NWK9 470 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 RBPJLQ9UBG7 517 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 MYO6Q9UM54 1294 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 RBM47A0AV96 593 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 NKRFO15226 690 aaKnown RBP eCLIP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 PMM2O15305 246 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms