RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 MYMKA6NI61 221 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 GPR32O75388 356 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 MAPTP10636 758 aaKnown RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 PMS1P54277 932 aaKnown RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 ZYXQ15942 572 aaKnown RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 DUSP28Q4G0W2 176 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 CCDC12Q8WUD4 166 aaPredicted RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 DHX38Q92620 1227 aaKnown RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 WNT8BQ93098 351 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 TRIM9Q9C026 710 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 ADAMTS10Q9H324 1103 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 DACT1Q9NYF0 836 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 SYNRGQ9UMZ2 1314 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 NEMFO60524 1076 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 MYL1P05976 194 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 PGK2P07205 417 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 IRX5P78411 483 aaPredicted RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 CCZ1BP86790 482 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 CCZ1P86791 482 aaPredicted RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 NAB2Q15742 525 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 USH1GQ495M9 461 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 ARTNQ5T4W7 220 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 ANKRD13CQ8N6S4 541 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 FBXL18Q96ME1 805 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 APBA2Q99767 749 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 TTYH3Q9C0H2 523 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 TNMDQ9H2S6 317 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 MAGEF1Q9HAY2 307 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 RC3H2Q9HBD1 1191 aaKnown RBP5.6□□□□□ -1.51
RIF1-207ENST00000454583 OGDHLQ9ULD0 1010 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 PPME1Q9Y570 386 aa5.6□□□□□ -1.51
RIF1-207ENST00000454583 RBAK-RBAKDNI3L0D1 243 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 FIBPO43427 364 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 ZNF202O95125 648 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 C22orf31O95567 290 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 MMP3P08254 477 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CDC25AP30304 524 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CASP5P51878 434 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 MRPL12P52815 198 aaKnown RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 SREBF2Q12772 1141 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 EPHA7Q15375 998 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 ZNF174Q15697 407 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CCDC144BQ3MJ40 725 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 XKR4Q5GH76 650 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 C15orf39Q6ZRI6 1047 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 C12orf56Q8IXR9 622 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CCDC82Q8N4S0 544 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 KIAA1524Q8TCG1 905 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 FAM200AQ8TCP9 573 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 MRFAP1L1Q96HT8 127 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 NAP1L4Q99733 375 aaKnown RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 OSBPL7Q9BZF2 842 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CUEDC2Q9H467 287 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 OLFML3Q9NRN5 406 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 TFIP11Q9UBB9 837 aaKnown RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 ZNF106Q9H2Y7 1883 aaKnown RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 IKBKBO14920 756 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 BMP15O95972 392 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 POU5F1BQ06416 359 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 ALKAL1Q6UXT8 129 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 PLEKHH3Q7Z736 793 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 SMAP1Q8IYB5 467 aaPredicted RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 UBR7Q8N806 425 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 ZNF507Q8TCN5 953 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 EIF2AK1Q9BQI3 630 aaKnown RBP5.59□□□□□ -1.51
RIF1-207ENST00000454583 TINF2Q9BSI4 451 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 SYT11Q9BT88 431 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 RUSC1Q9BVN2 902 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 IFT122Q9HBG6 1241 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 FAM53CQ9NYF3 392 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 CFAP45Q9UL16 551 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 PNMA3Q9UL41 463 aa5.59□□□□□ -1.51
RIF1-207ENST00000454583 KDM3AQ9Y4C1 1321 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 TGFB1I1O43294 461 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 CCNT1O60563 726 aaKnown RBP5.59□□□□□ -1.52
RIF1-207ENST00000454583 ZBED4O75132 1171 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 OFD1O75665 1012 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 CAVIN2O95810 425 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 SUPT20HL2P0C7V6 817 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 PLCG1P19174 1290 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 RARRES1P49788 294 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 ZNF157P51786 506 aaPredicted RBP5.59□□□□□ -1.52
RIF1-207ENST00000454583 FAM187BQ17R55 369 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 DEFB115Q30KQ5 88 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 MIIPQ5JXC2 388 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 RINT1Q6NUQ1 792 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 TTI2Q6NXR4 508 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 NYAP1Q6ZVC0 841 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 SLFN12Q8IYM2 578 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 LMO3Q8TAP4 145 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 NSUN6Q8TEA1 469 aaKnown RBP5.59□□□□□ -1.52
RIF1-207ENST00000454583 ZNF333Q96JL9 665 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 SEMA6BQ9H3T3 888 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 TMOD4Q9NZQ9 345 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 KCND2Q9NZV8 630 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 ARHGAP28Q9P2N2 729 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms