RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 KCTD16Q68DU8 428 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 GBP6Q6ZN66 633 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
SMPD4-213ENST00000454468 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 HDAC7Q8WUI4 952 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 PARVGQ9HBI0 331 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 JRKLQ9Y4A0 524 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 PDE2AO00408 941 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-213ENST00000454468 KLRC1P26715 233 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 NT5C2P49902 561 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 SPP2Q13103 211 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 GIT2Q14161 759 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 XKR9Q5GH70 373 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 ZNF772Q68DY9 489 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-213ENST00000454468 DAAM2Q86T65 1068 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 TXLNBQ8N3L3 684 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 LXNQ9BS40 222 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
SMPD4-213ENST00000454468 RASSF10A6NK89 507 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 AKAP3O75969 853 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 SIAH1Q8IUQ4 282 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 OSBPL9Q96SU4 736 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 TISP43B9A030 160 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 NFIBO00712 420 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-213ENST00000454468 ARSHQ5FYA8 562 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-213ENST00000454468 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 H3BQF6 201 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 GNA14O95837 355 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 RPA1P27694 616 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 KCNMA1Q12791 1236 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 CEP55Q53EZ4 464 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 ODF2Q5BJF6 829 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 ALKBH5Q6P6C2 394 aaKnown RBP13.1□□□□□ -0.31
SMPD4-213ENST00000454468 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-213ENST00000454468 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 ADAM21Q9UKJ8 722 aa13.1□□□□□ -0.31
SMPD4-213ENST00000454468 IGKV6D-41A0A0C4DH26 115 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 SMIM23A6NLE4 172 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 EDIL3O43854 480 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 ZEB2O60315 1214 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 SERPING1P05155 500 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 DLATP10515 647 aaKnown RBP13.09□□□□□ -0.31
SMPD4-213ENST00000454468 TNFAIP3P21580 790 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 GJC1P36383 396 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 PEX26Q7Z412 305 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 EPB41L5Q9HCM4 733 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 BTAF1O14981 1849 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 STAT1P42224 750 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 GCLMP48507 274 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-213ENST00000454468 PTK2Q05397 1052 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 EEPD1Q7L9B9 569 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 FAM20AQ96MK3 541 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 CEP72Q9P209 647 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 DMGDHQ9UI17 866 aaKnown RBP13.09□□□□□ -0.31
SMPD4-213ENST00000454468 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 PEX3P56589 373 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 TUBB2AQ13885 445 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 RINT1Q6NUQ1 792 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 GLYCTKQ8IVS8 523 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 PPM1KQ8N3J5 372 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 TUBB2BQ9BVA1 445 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 FAM204AQ9H8W3 233 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
SMPD4-213ENST00000454468 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 ZSCAN5CA6NGD5 496 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-213ENST00000454468 INPP5BP32019 993 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 NPEPPSP55786 919 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-213ENST00000454468 UCHL3P15374 230 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 ATP1A2P50993 1020 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 USP14P54578 494 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 CETN1Q12798 172 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 PLA2G4FQ68DD2 849 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 SPATA4Q8NEY3 305 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms