RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 BZW1Q7L1Q6 419 aaKnown RBP12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SPAG5Q96R06 1193 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TMEM109Q9BVC6 243 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 RAB34Q9BZG1 259 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 EPB41L4BQ9H329 900 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 LRRC4CQ9HCJ2 640 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CLTAP09496 248 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CCND1P24385 295 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TXKP42681 527 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ZNF131P52739 623 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NAPAP54920 295 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DRG2P55039 364 aaKnown RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DPY19L2P1Q6NXN4 242 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NT5DC3Q86UY8 548 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GLIS3Q8NEA6 775 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DNAJC19Q96DA6 116 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NSRP1Q9H0G5 558 aaKnown RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CNOT7Q9UIV1 285 aaKnown RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ATP8A1Q9Y2Q0 1164 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FRMD3A2A2Y4 597 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 AGTP01019 485 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NQO1P15559 274 aaKnown RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PTENP60484 403 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 COASYQ13057 564 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CDCA2Q69YH5 1023 aaPredicted RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NAIF1Q69YI7 327 aaPredicted RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ALKBH5Q6P6C2 394 aaKnown RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 COL23A1Q86Y22 540 aaPredicted RBP12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 LRRC34Q8IZ02 419 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 HOMER3Q9NSC5 361 aa12.18□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ITGB4P16144 1822 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FLOT1O75955 427 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SMARCA1P28370 1054 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CCNHP51946 323 aaPredicted RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 MECOMQ03112 1051 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PPARDQ03181 441 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CLUL1Q15846 466 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CALCRLQ16602 461 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GALNTL6Q49A17 601 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PARP10Q53GL7 1025 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TBC1D1Q86TI0 1168 aaPredicted RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NEK9Q8TD19 979 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 THOC1Q96FV9 657 aaKnown RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PRDM11Q9NQV5 511 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PANK4Q9NVE7 773 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GOLGA6L10A0A0M3HER8 536 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FAM187AA6NFU0 413 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 OAS1P00973 400 aaKnown RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CCNG1P51959 295 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PMS2P54278 862 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TNFAIP8L3Q5GJ75 292 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FAM26FQ5R3K3 315 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PROCA1Q8NCQ7 364 aaPredicted RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 AGAP11Q8TF27 550 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ZNF483Q8TF39 744 aaPredicted RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GOLPH3Q9H4A6 298 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ROBO3Q96MS0 1386 aa12.17□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SHBGP04278 402 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 EDRF1Q3B7T1 1238 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 BTNL9Q6UXG8 535 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ELAC2Q9BQ52 826 aaKnown RBP12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ERP44Q9BS26 406 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 STMN4Q9H169 189 aaPredicted RBP12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 CORO1CQ9ULV4 474 aaPredicted RBP12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 AGAP1Q9UPQ3 857 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PHLPP1O60346 1717 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 H2AFZP0C0S5 128 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 RARAP10276 462 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PDE6CP51160 858 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KLRC3Q07444 240 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DENND2CQ68D51 928 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 H2AFVQ71UI9 128 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KIRREL3Q8IZU9 778 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms