RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 NELFCDQ8IXH7 590 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 DIS3L2Q8IYB7 885 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MYOCDQ8IZQ8 938 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 ATP11CQ8NB49 1132 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MDM1Q8TC05 714 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 NEK9Q8TD19 979 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 INPP4AQ96PE3 977 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MTRQ99707 1265 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MTA3Q9BTC8 594 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 DDX23Q9BUQ8 820 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 POLD4Q9HCU8 107 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 AGPAT5Q9NUQ2 364 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 SEC63Q9UGP8 760 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 DBNLQ9UJU6 430 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PNMA2Q9UL42 364 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 TMEM98Q9Y2Y6 226 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RGPD1P0DJD0 1748 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 LRRC37A3O60309 1634 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 DIP2AQ14689 1571 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MAP3K19Q56UN5 1328 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 IGSF1Q8N6C5 1336 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PASKQ96RG2 1323 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 FAM187AA6NFU0 413 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PGRMC1O00264 195 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RGL2O15211 777 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 DEXIO95424 95 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PABPC4LP0CB38 370 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MARK3P27448 753 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 LIFRP42702 1097 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MAGEA10P43363 369 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 CD97P48960 835 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 EIF4A1P60842 406 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RPL26P61254 145 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 USP46P62068 366 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 SLC34A1Q06495 639 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 EPHA10Q5JZY3 1008 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 CHST3Q7LGC8 479 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PHLDB2Q86SQ0 1253 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 SGMS1Q86VZ5 419 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 VSIG1Q86XK7 387 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 IFNLR1Q8IU57 520 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 IRF2BP1Q8IU81 584 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 SUCLG2Q96I99 432 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 TUBGCP5Q96RT8 1024 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 FMO2Q99518 471 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 CORO1BQ9BR76 489 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 EIF2AQ9BY44 585 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 DPH5Q9H2P9 285 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 TLE6Q9H808 572 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 NKX1-2Q9UD57 310 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 MAP3K2Q9Y2U5 619 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 LMTK3Q96Q04 1460 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 USP31Q70CQ4 1352 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 PLEKHG1Q9ULL1 1385 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 SIGLEC16A6NMB1 481 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 ZNF263O14978 683 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 FOXO3O43524 673 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
SMCO1-202ENST00000452776 ITGA2BP08514 1039 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 CYP11B2P19099 503 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 POLD1P28340 1107 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 CDK7P50613 346 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 PMS2P54278 862 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 BPIFB4P59827 614 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 FAM69CQ0P6D2 419 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 NEXNQ0ZGT2 675 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 R3HDM1Q15032 1099 aaKnown RBP9.07□□□□□ -0.96
SMCO1-202ENST00000452776 SLC9C1Q4G0N8 1177 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 TBC1D9BQ66K14 1250 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 MFSD5Q6N075 450 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 KLHL7Q8IXQ5 586 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 FITM2Q8N6M3 262 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 DGCR14Q96DF8 476 aaKnown RBP9.07□□□□□ -0.96
SMCO1-202ENST00000452776 MS4A14Q96JA4 679 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 TRIM47Q96LD4 638 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMCO1-202ENST00000452776 TXLNGYQ9BZA5 131 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 SAR1AQ9NR31 198 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 GJB4Q9NTQ9 266 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 PTTG2Q9NZH5 202 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 CHPF2Q9P2E5 772 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 THEGQ9P2T0 379 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 DNAJB4Q9UDY4 337 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 TFR2Q9UP52 801 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 SLIT1O75093 1534 aa9.07□□□□□ -0.96
SMCO1-202ENST00000452776 MYH8P13535 1937 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ARHGAP23Q9P227 1491 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 LAMA4Q16363 1823 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ATP8B3O60423 1300 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TMEM110-MUSTN1A8MSY1 372 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 A8MUI8 341 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 BTBD18B2RXH4 712 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SOCS7O14512 581 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms