RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TGS1Q96RS0 853 aaKnown RBP14.17□□□□□ -0.14
CPSF4-208ENST00000452047 ZNF577Q9BSK1 485 aa14.17□□□□□ -0.14
CPSF4-208ENST00000452047 TBC1D22BQ9NU19 505 aa14.17□□□□□ -0.14
CPSF4-208ENST00000452047 PDRG1Q9NUG6 133 aa14.17□□□□□ -0.14
CPSF4-208ENST00000452047 PCDHA2Q9Y5H9 948 aa14.17□□□□□ -0.14
CPSF4-208ENST00000452047 CDY2AQ9Y6F7 541 aa14.17□□□□□ -0.14
CPSF4-208ENST00000452047 TTC3P53804 2025 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 EVPLQ92817 2033 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 M0R2N6 131 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 GTPBP6O43824 516 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-208ENST00000452047 DEXIO95424 95 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 ATP4AP20648 1035 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
CPSF4-208ENST00000452047 STK3Q13188 491 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 NPY5RQ15761 445 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 PRR16Q569H4 304 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 TJAP1Q5JTD0 557 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 FAM160B1Q5W0V3 765 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-208ENST00000452047 TSHZ1Q6ZSZ6 1077 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 GDPD5Q8WTR4 605 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 ATXN2LQ8WWM7 1075 aaKnown RBP14.16□□□□□ -0.14
CPSF4-208ENST00000452047 FAM49AQ9H0Q0 323 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-208ENST00000452047 SUGCTQ9HAC7 445 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 MTUS1Q9ULD2 1270 aa14.16□□□□□ -0.14
CPSF4-208ENST00000452047 BDP1A6H8Y1 2624 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 COL1A2P08123 1366 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 SMIM35A0A1B0GVV1 85 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 ZBTB42B2RXF5 422 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 CPLX1O14810 134 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 BACH1O14867 736 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 HBP1O60381 514 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 USP11P51784 963 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 NLRP5P59047 1200 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 ANAPC15P60006 121 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 KRT76Q01546 638 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 MIS18BP1Q6P0N0 1132 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 PDXDC2PQ6P474 469 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 MTHFD1LQ6UB35 978 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 SMAP1Q8IYB5 467 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-208ENST00000452047 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-208ENST00000452047 DAGLBQ8NCG7 672 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 IL17RAQ96F46 866 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 AGO3Q9H9G7 860 aaKnown RBP14.15□□□□□ -0.14
CPSF4-208ENST00000452047 ZNF302Q9NR11 478 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 MAFBQ9Y5Q3 323 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-208ENST00000452047 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
CPSF4-208ENST00000452047 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.15
CPSF4-208ENST00000452047 UPP2O95045 317 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 TMEM62Q0P6H9 643 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 SCRN1Q12765 414 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 IER5Q5VY09 327 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 SWSAP1Q6NVH7 229 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 TBCKQ8TEA7 893 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 LINC01599Q8WXQ3 324 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 SYMPKQ92797 1274 aaKnown RBP14.14□□□□□ -0.15
CPSF4-208ENST00000452047 ASB2Q96Q27 587 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 YME1L1Q96TA2 773 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 RC3H2Q9HBD1 1191 aaKnown RBP14.14□□□□□ -0.15
CPSF4-208ENST00000452047 LMCD1Q9NZU5 365 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 TRPV2Q9Y5S1 764 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 BRWD1Q9NSI6 2320 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 KDM3AQ9Y4C1 1321 aa14.14□□□□□ -0.15
CPSF4-208ENST00000452047 ATG2AQ2TAZ0 1938 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 MSH4O15457 936 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 KLRC1P26715 233 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 CD52P31358 61 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 MRPS5P82675 430 aaKnown RBP14.13□□□□□ -0.15
CPSF4-208ENST00000452047 CPLX2Q6PUV4 134 aaKnown RBP14.13□□□□□ -0.15
CPSF4-208ENST00000452047 BLIDQ8IZY5 108 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 TPCN1Q9ULQ1 816 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 PCDHA10Q9Y5I2 948 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 NCOR1O75376 2440 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
CPSF4-208ENST00000452047 CYP3A7-CYP3A51PA0A087WV96 503 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 WDR64B1ANS9 1081 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 M0QZ92 97 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 ENPP3O14638 875 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 PFKFB2O60825 505 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 C22orf31O95567 290 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 PSAPP07602 524 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 LINC00271P0C7V0 271 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 CYP3A7P24462 503 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 TFF2Q03403 129 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 ZNF484Q5JVG2 852 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 KIAA0319LQ8IZA0 1049 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 CRIPAKQ8N1N5 446 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 NME8Q8N427 588 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
CPSF4-208ENST00000452047 SAMD11Q96NU1 681 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 RIT2Q99578 217 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 CELF4Q9BZC1 486 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms