RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PCDHA2Q9Y5H9 948 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 COL1A2P08123 1366 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 CENPFP49454 3210 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 SMIM35A0A1B0GVV1 85 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 MBLAC1A4D2B0 266 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 VPS37CA5D8V6 355 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 EML1O00423 815 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 LAD1O00515 517 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 OATP04181 439 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 OR52Z1P0C646 297 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 ACTN1P12814 892 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 ATP4AP20648 1035 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 SYT1P21579 422 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 KLRC1P26715 233 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 TOB1P50616 345 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 TMEM266Q2M3C6 531 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 HABP4Q5JVS0 413 aaKnown RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 MARCH8Q5T0T0 291 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 IER5Q5VY09 327 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 PSRC1Q6PGN9 363 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 MTHFD1LQ6UB35 978 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 LRRC8DQ7L1W4 858 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 OTUD6AQ7L8S5 288 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 TRMT1LQ7Z2T5 733 aaKnown RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 EXOC8Q8IYI6 725 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 NEK9Q8TD19 979 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 SCLYQ96I15 445 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 RAB34Q9BZG1 259 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 FTOQ9C0B1 505 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL8A1-203ENST00000452013 WNT8AQ9H1J5 351 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 TMEM60Q9H2L4 133 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 STK24Q9Y6E0 443 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 UMODL1Q5DID0 1318 aa9.97□□□□□ -0.81
COL8A1-203ENST00000452013 M0QZ92 97 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 WNT7AO00755 349 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ZNF862O60290 1169 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ACRP10323 421 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 TMOD1P28289 359 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 TECP42680 631 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 PTGDRQ13258 359 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 PDIA5Q14554 519 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 NBR1Q14596 966 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 SHHQ15465 462 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 TMEM240Q5SV17 173 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ZNF618Q5T7W0 954 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ZNF365Q70YC5 407 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 DEFB128Q7Z7B8 93 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 C4orf19Q8IY42 314 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 C4orf32Q8N8J7 132 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ERMNQ8TAM6 284 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 DYDC2Q96IM9 177 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 EIF2AK1Q9BQI3 630 aaKnown RBP9.96□□□□□ -0.82
COL8A1-203ENST00000452013 JPH2Q9BR39 696 aaPredicted RBP9.96□□□□□ -0.82
COL8A1-203ENST00000452013 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
COL8A1-203ENST00000452013 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.82
COL8A1-203ENST00000452013 PPME1Q9Y570 386 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 PCDHB6Q9Y5E3 794 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 IGSF9BQ9UPX0 1349 aa9.96□□□□□ -0.82
COL8A1-203ENST00000452013 STX6O43752 255 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 SLITRK3O94933 977 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 BMP15O95972 392 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL8A1-203ENST00000452013 PRPHP41219 470 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 DNM2P50570 870 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 EPHB4P54760 987 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 CDC42EP1Q00587 391 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 PRKCEQ02156 737 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 SPIRE1Q08AE8 756 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 FAM26DQ5JW98 314 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 FAM43BQ6ZT52 329 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-203ENST00000452013 C16orf59Q7L2K0 433 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 TPH2Q8IWU9 490 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 METTL13Q8N6R0 699 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 HSD17B14Q9BPX1 270 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL8A1-203ENST00000452013 FAM49AQ9H0Q0 323 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-203ENST00000452013 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.95□□□□□ -0.82
COL8A1-203ENST00000452013 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 LRWD1Q9UFC0 647 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-203ENST00000452013 MYH6P13533 1939 aa9.95□□□□□ -0.82
COL8A1-203ENST00000452013 EFCAB14O75071 495 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 LYPLA2O95372 231 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 CXCL10P02778 98 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL8A1-203ENST00000452013 TBC1D8BQ0IIM8 1120 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 CTTNQ14247 550 aaKnown RBP9.94□□□□□ -0.82
COL8A1-203ENST00000452013 TARBP2Q15633 366 aaKnown RBP9.94□□□□□ -0.82
COL8A1-203ENST00000452013 UGCGQ16739 394 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 LRIT3Q3SXY7 679 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms