RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ZMYND12Q9H0C1 365 aa8.91□□□□□ -0.98
CNOT4-207ENST00000451834 DEF6Q9H4E7 631 aa8.91□□□□□ -0.98
CNOT4-207ENST00000451834 BIN2Q9UBW5 565 aaPredicted RBP8.91□□□□□ -0.98
CNOT4-207ENST00000451834 LPXNO60711 386 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 ZRANB2O95218 330 aaKnown RBP eCLIP8.9□□□□□ -0.987e-6■■■■■ 37.3
CNOT4-207ENST00000451834 F13A1P00488 732 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 NTRK3Q16288 839 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 CCDC83Q8IWF9 413 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 CCAR2Q8N163 923 aaKnown RBP8.9□□□□□ -0.98
CNOT4-207ENST00000451834 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.9□□□□□ -0.982e-7■■■□□ 14.8
CNOT4-207ENST00000451834 NUP62CLQ9H1M0 184 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 TNMDQ9H2S6 317 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 RABEP2Q9H5N1 569 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 STK39Q9UEW8 545 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 KAT6AQ92794 2004 aa8.9□□□□□ -0.98
CNOT4-207ENST00000451834 IGLV3-22A0A075B6J6 115 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.99
CNOT4-207ENST00000451834 SELPP16109 830 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 PSEN2P49810 448 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 TPM4P67936 248 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 FAM189BP81408 668 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 Q4G0T1 1027 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 KCTD1Q719H9 257 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 DDX11Q96FC9 970 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 LBHD1Q9BQE6 289 aaPredicted RBP8.9□□□□□ -0.99
CNOT4-207ENST00000451834 CARD6Q9BX69 1037 aa8.9□□□□□ -0.99
CNOT4-207ENST00000451834 PRPF3O43395 683 aaKnown RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 SNW1Q13573 536 aaKnown RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 PCBP1Q15365 356 aaKnown RBP eCLIP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 ZYXQ15942 572 aaKnown RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 C9orf50Q5SZB4 431 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 IFNLR1Q8IU57 520 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 NECAB1Q8N987 351 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 UBXN4Q92575 508 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 P2RX5Q93086 422 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 VPS18Q9P253 973 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 DNAI1Q9UI46 699 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 FANCMQ8IYD8 2048 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 NRCAMQ92823 1304 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 NCK2O43639 380 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 EDIL3O43854 480 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 RB1P06400 928 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 CCZ1BP86790 482 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 CCZ1P86791 482 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 SETQ01105 290 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 BRDTQ58F21 947 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 IFIT1BQ5T764 474 aaKnown RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 HOMER1Q86YM7 354 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 GOLGA6L1Q8N7Z2 621 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 BARHL2Q9NY43 387 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 LZTS1Q9Y250 596 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 URI1O94763 535 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 NR3C2P08235 984 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 CEBPZQ03701 1054 aaKnown RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 POU5F1BQ06416 359 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 GOLGA8FQ08AF8 430 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 GOLGA8DPQ0D2H9 430 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 KCNC3Q14003 757 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 PRAMEF19Q5SWL8 479 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 OR6J1Q8NGC5 347 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 CDX2Q99626 313 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-207ENST00000451834 OBSL1O75147 1896 aa8.89□□□□□ -0.99
CNOT4-207ENST00000451834 IGKV6-21A0A0C4DH24 114 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 STXBP3O00186 592 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 FANCGO15287 622 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 NR1I2O75469 434 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 MUTP22033 750 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 UBA1P22314 1058 aaKnown RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PDE4DQ08499 809 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 GPS2Q13227 327 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 MCM6Q14566 821 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 C11orf57Q6ZUT1 292 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 ZNF654Q8IZM8 581 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PBX4Q9BYU1 374 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 SUGCTQ9HAC7 445 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 ORC3Q9UBD5 711 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PRKAG3Q9UGI9 489 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 KLRF2D3W0D1 207 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 MEIS1O00470 390 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 ACTN1P12814 892 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 SCP2P22307 547 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PFKFB3Q16875 520 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 CREB3L3Q68CJ9 461 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PDE12Q6L8Q7 609 aaKnown RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 ZNF274Q96GC6 653 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 TAAR1Q96RJ0 339 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 RNF26Q9BY78 433 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PDGFCQ9NRA1 345 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 TMEM39AQ9NV64 488 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 SMC3Q9UQE7 1217 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 PCDHA2Q9Y5H9 948 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.88□□□□□ -0.997e-7■□□□□ 9.6
CNOT4-207ENST00000451834 MAFBQ9Y5Q3 323 aaPredicted RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 RBM8AQ9Y5S9 174 aaKnown RBP8.88□□□□□ -0.99
CNOT4-207ENST00000451834 DENND4CQ5VZ89 1909 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 SMIM35A0A1B0GVV1 85 aa8.88□□□□□ -0.99
CNOT4-207ENST00000451834 RRN3P2A6NIE6 340 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms