RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 WASF1Q92558 559 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 FAM167AQ96KS9 214 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 TGS1Q96RS0 853 aaKnown RBP18.17■□□□□ 0.5
SGCE-208ENST00000450385 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
SGCE-208ENST00000450385 SLKQ9H2G2 1235 aaPredicted RBP18.17■□□□□ 0.5
SGCE-208ENST00000450385 ZNF302Q9NR11 478 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 VPS54Q9P1Q0 977 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 CEP131Q9UPN4 1083 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 MAFBQ9Y5Q3 323 aaPredicted RBP18.17■□□□□ 0.5
SGCE-208ENST00000450385 TTC3P53804 2025 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 EVPLQ92817 2033 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 BACH1O14867 736 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 PFKFB2O60825 505 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 CCNE2O96020 404 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 CTSHP09668 335 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 SFNP31947 248 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 MRPS6P82932 125 aaKnown RBP18.16■□□□□ 0.5
SGCE-208ENST00000450385 Q4G0T1 1027 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 PRR16Q569H4 304 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 BLIDQ8IZY5 108 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 SP7Q8TDD2 431 aaPredicted RBP18.16■□□□□ 0.5
SGCE-208ENST00000450385 DNAJB3Q8WWF6 145 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
SGCE-208ENST00000450385 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 WDR64B1ANS9 1081 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 M0R2N6 131 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 TCTN1Q2MV58 587 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 FBXO47Q5MNV8 452 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 SWSAP1Q6NVH7 229 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 MTHFD1LQ6UB35 978 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 RUFY4Q6ZNE9 571 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 MYOCDQ8IZQ8 938 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 LENG9Q96B70 501 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 NAP1L4Q99733 375 aaKnown RBP18.15■□□□□ 0.5
SGCE-208ENST00000450385 MTCH2Q9Y6C9 303 aa18.15■□□□□ 0.5
SGCE-208ENST00000450385 PRRC2BQ5JSZ5 2229 aaKnown RBP18.15■□□□□ 0.5
SGCE-208ENST00000450385 SIP14410 1827 aa18.14■□□□□ 0.5
SGCE-208ENST00000450385 LOXHD1Q8IVV2 1947 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 MAGEB2O15479 319 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 IGBP1P78318 339 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 LPIN1Q14693 890 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 AAK1Q2M2I8 961 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.14■□□□□ 0.49
SGCE-208ENST00000450385 KRT25Q7Z3Z0 450 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 ARNTL2Q8WYA1 636 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 TRPV2Q9Y5S1 764 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 CDY2AQ9Y6F7 541 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 REV3LO60673 3130 aa18.14■□□□□ 0.49
SGCE-208ENST00000450385 SPTBN5Q9NRC6 3674 aaKnown RBP18.13■□□□□ 0.49
SGCE-208ENST00000450385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.13■□□□□ 0.49
SGCE-208ENST00000450385 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 KLRC1P26715 233 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 JAK3P52333 1124 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 TJAP1Q5JTD0 557 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 CCDC60Q8IWA6 550 aaPredicted RBP18.13■□□□□ 0.49
SGCE-208ENST00000450385 TBCKQ8TEA7 893 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 SLC5A5Q92911 643 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 MBOAT7Q96N66 472 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 CELF4Q9BZC1 486 aaKnown RBP18.13■□□□□ 0.49
SGCE-208ENST00000450385 THEGQ9P2T0 379 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 COG5Q9UP83 839 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 RWDD3Q9Y3V2 267 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 IGSF9BQ9UPX0 1349 aa18.13■□□□□ 0.49
SGCE-208ENST00000450385 ENPP3O14638 875 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 GAS7O60861 476 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
SGCE-208ENST00000450385 MRPS5P82675 430 aaKnown RBP18.12■□□□□ 0.49
SGCE-208ENST00000450385 CDC42EP1Q00587 391 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 SCRN1Q12765 414 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 NONOQ15233 471 aaKnown RBP eCLIP18.12■□□□□ 0.49
SGCE-208ENST00000450385 CKAP2LQ8IYA6 745 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 IL27Q8NEV9 243 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 YME1L1Q96TA2 773 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 PHF20Q9BVI0 1012 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 DISC1Q9NRI5 854 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 SAMM50Q9Y512 469 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 RALGAPA2Q2PPJ7 1873 aa18.12■□□□□ 0.49
SGCE-208ENST00000450385 XIRP2A4UGR9 3374 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 LCHNA4D1U4 455 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 DDX39AO00148 427 aaKnown RBP18.11■□□□□ 0.49
SGCE-208ENST00000450385 MSH4O15457 936 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 RB1P06400 928 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 GHRP10912 638 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 TMOD1P28289 359 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 STK3Q13188 491 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 LRCH2Q5VUJ6 765 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 PPP4R3AQ6IN85 833 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 TEKT3Q9BXF9 490 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 TPCN1Q9ULQ1 816 aa18.11■□□□□ 0.49
SGCE-208ENST00000450385 ADAMTS3O15072 1205 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 EDIL3O43854 480 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 ATP4AP20648 1035 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 GRB10Q13322 594 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 NPY5RQ15761 445 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 KIAA0319LQ8IZA0 1049 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 ASB2Q96Q27 587 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms