RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 OGFRQ9NZT2 677 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 IGKV6D-21A0A0A0MT36 114 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 H3BRB1 525 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ZNF862O60290 1169 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 F2P00734 622 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 CYP4A11Q02928 519 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 MIER3Q7Z3K6 550 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 SLFN12Q8IYM2 578 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 SH2D3AQ9BRG2 576 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
CCDC171-203ENST00000449575 TUT1Q9H6E5 874 aaKnown RBP11.05□□□□□ -0.64
CCDC171-203ENST00000449575 CCDC66A2RUB6 948 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 ZBTB39O15060 712 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 LRRC26Q2I0M4 334 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 KIAA0753Q2KHM9 967 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 SPECC1Q5M775 1068 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 ANKRD7Q92527 254 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 GLG1Q92896 1179 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 CLIC6Q96NY7 704 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 STARD7Q9NQZ5 370 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 PCDHA10Q9Y5I2 948 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 WDR64B1ANS9 1081 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 HAS3O00219 553 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 BACH1O14867 736 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 LGR5O75473 907 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 ZNF200P98182 395 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-203ENST00000449575 CTTNQ14247 550 aaKnown RBP11.04□□□□□ -0.64
CCDC171-203ENST00000449575 SYCP1Q15431 976 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 BRDTQ58F21 947 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-203ENST00000449575 USP49Q70CQ1 688 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 NECAB2Q7Z6G3 386 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 GLT1D1Q96MS3 346 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-203ENST00000449575 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
CCDC171-203ENST00000449575 PSEN2P49810 448 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 STAT5BP51692 787 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 ORC2Q13416 577 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-203ENST00000449575 ITGA7Q13683 1181 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 MFSD10Q14728 455 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 ECM1Q16610 540 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 LINC00301Q8NCQ3 95 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 ZNF302Q9NR11 478 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 HDAC6Q9UBN7 1215 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 ZEB2O60315 1214 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 IGSF22Q8N9C0 903 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 RNF214Q8ND24 703 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 EIF2AK1Q9BQI3 630 aaKnown RBP11.03□□□□□ -0.64
CCDC171-203ENST00000449575 MMTAG2Q9BU76 263 aaKnown RBP11.03□□□□□ -0.64
CCDC171-203ENST00000449575 FBXO2Q9UK22 296 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-203ENST00000449575 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-203ENST00000449575 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-203ENST00000449575 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
CCDC171-203ENST00000449575 IGSF9BQ9UPX0 1349 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 MED24O75448 989 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SLITRK3O94933 977 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 STBD1O95210 358 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 PSAPP07602 524 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SPATA31C1P0DKV0 1188 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SLC39A14Q15043 492 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 PDXDC2PQ6P474 469 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 CTAGE1Q96RT6 745 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
CCDC171-203ENST00000449575 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 LAMA3Q16787 3333 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SCN5AQ14524 2016 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SFNP31947 248 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 PRPHP41219 470 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 JAK3P52333 1124 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 FAM47CQ5HY64 1035 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 GDF6Q6KF10 455 aaPredicted RBP11.02□□□□□ -0.65
CCDC171-203ENST00000449575 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
CCDC171-203ENST00000449575 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 HSD17B14Q9BPX1 270 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 LXNQ9BS40 222 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 TRPV6Q9H1D0 765 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SMARCAD1Q9H4L7 1026 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 AZI2Q9H6S1 392 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SETD4Q9NVD3 440 aa11.02□□□□□ -0.65
CCDC171-203ENST00000449575 SIP14410 1827 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 LAD1O00515 517 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 SMIM10L2AP0DMW4 78 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 SMIM10L2BP0DMW5 78 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 CDK7P50613 346 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 FAM193AP78312 1265 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms