RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SEC24BO95487 1268 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 RALAP11233 206 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 SCRN1Q12765 414 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 ZBTB41Q5SVQ8 909 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 CYFIP1Q7L576 1253 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 ZNF713Q8N859 430 aaPredicted RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 MRPL47Q9HD33 250 aaKnown RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 ZNF75DP51815 510 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 ZNRF3Q9ULT6 936 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 PASKQ96RG2 1323 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 MXI1P50539 228 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 TRIM67Q6ZTA4 783 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 MIPOL1Q8TD10 442 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 TMEM247A6NEH6 219 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 KIF3CO14782 793 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 PRPF4O43172 522 aaKnown RBP eCLIP13.72□□□□□ -0.212e-8■□□□□ 10.8
AC006001.3-201ENST00000449307 TTC4O95801 387 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 EZH2Q15910 746 aaKnown RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 THEMIS2Q5TEJ8 643 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 SPATA2LQ8IUW3 424 aaPredicted RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 PASD1Q8IV76 773 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 NDUFAB1O14561 156 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 BAG2O95816 211 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 TUBB2AQ13885 445 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 SMYD4Q8IYR2 804 aaPredicted RBP13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
AC006001.3-201ENST00000449307 OCM2P0CE71 109 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 OCMP0CE72 109 aaPredicted RBP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 CDC25AP30304 524 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 C2CD2LO14523 706 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 HADHAP40939 763 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 LMNB2Q03252 620 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 SAR1BQ9Y6B6 198 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 KIF1BO60333 1816 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 BBOF1Q8ND07 529 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 AK8Q96MA6 479 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 USP28Q96RU2 1077 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 RSPH10B2B2RC85 870 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 DNAJC6O75061 913 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 RSPH10BP0C881 870 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 PAMP19021 973 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 SGO2Q562F6 1265 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 DESI2Q9BSY9 194 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 DONSONQ9NYP3 566 aa13.71□□□□□ -0.21
AC006001.3-201ENST00000449307 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 MGEA5O60502 916 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 PRDX5P30044 214 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 RFC1P35251 1148 aaPredicted RBP13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 PRELPP51888 382 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 IMPACTQ9P2X3 320 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 SNX2O60749 519 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 RNF40O75150 1001 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 ZBED1O96006 694 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 FAM213AQ9BRX8 229 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 RRAGCQ9HB90 399 aa13.71□□□□□ -0.22
AC006001.3-201ENST00000449307 VCPP55072 806 aaKnown RBP13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 EHHADHQ08426 723 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 KLC3Q6P597 504 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 HYOU1Q9Y4L1 999 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 E5RI56 91 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 CYP2E1P05181 493 aaPredicted RBP13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 CELF1Q92879 486 aaKnown RBP13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 MAGOHBQ96A72 148 aaKnown RBP13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 SERPIND1P05546 499 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 HMBSP08397 361 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 TRIP13Q15645 432 aaPredicted RBP13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 PCGF5Q86SE9 256 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 LZICQ8WZA0 190 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 MAGEF1Q9HAY2 307 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 COPRSQ9NQ92 184 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 KLHL8Q9P2G9 620 aaPredicted RBP13.7□□□□□ -0.22
AC006001.3-201ENST00000449307 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms