RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 COL1A2P08123 1366 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
COPS7B-213ENST00000449174 CD52P31358 61 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 SREBF1P36956 1147 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 EXOSC10Q01780 885 aaKnown RBP13.26□□□□□ -0.29
COPS7B-213ENST00000449174 PAK2Q13177 524 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 PLCB4Q15147 1175 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 FAM160B1Q5W0V3 765 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 MCTP2Q6DN12 878 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 RAB11FIP4Q86YS3 637 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 ADHFE1Q8IWW8 467 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 CRIPAKQ8N1N5 446 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 POP1Q99575 1024 aaKnown RBP13.26□□□□□ -0.29
COPS7B-213ENST00000449174 CELF4Q9BZC1 486 aaKnown RBP13.26□□□□□ -0.29
COPS7B-213ENST00000449174 UPF3BQ9BZI7 483 aaKnown RBP13.26□□□□□ -0.29
COPS7B-213ENST00000449174 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
COPS7B-213ENST00000449174 BARHL2Q9NY43 387 aa13.26□□□□□ -0.29
COPS7B-213ENST00000449174 TTC3P53804 2025 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 IGKV6D-21A0A0A0MT36 114 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 SMCO2A6NFE2 343 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 STXBP3O00186 592 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 GRM6O15303 877 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 HBP1O60381 514 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 SCG2P13521 617 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 ZNF76P36508 570 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
COPS7B-213ENST00000449174 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-213ENST00000449174 KRT76Q01546 638 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 ZP2Q05996 745 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 FUT2Q10981 343 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 ITGB3BPQ13352 177 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-213ENST00000449174 MTHFD1LQ6UB35 978 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 CYP2W1Q8TAV3 490 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 LINC01599Q8WXQ3 324 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 PADI3Q9ULW8 664 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
COPS7B-213ENST00000449174 ATG2AQ2TAZ0 1938 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 DCXO43602 365 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 ARP10275 920 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-213ENST00000449174 LTBRP36941 435 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 HYAL1Q12794 435 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 COL9A3Q14050 684 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-213ENST00000449174 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
COPS7B-213ENST00000449174 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 ZNF484Q5JVG2 852 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-213ENST00000449174 C1orf112Q9NSG2 853 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 LRFN2Q9ULH4 789 aa13.24□□□□□ -0.29
COPS7B-213ENST00000449174 MRPL42Q9Y6G3 142 aaKnown RBP13.24□□□□□ -0.29
COPS7B-213ENST00000449174 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-213ENST00000449174 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 FSD2A1L4K1 749 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 BACH1O14867 736 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 CYP3A4P08684 503 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 SARSP49591 514 aaKnown RBP13.23□□□□□ -0.29
COPS7B-213ENST00000449174 SETQ01105 290 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-213ENST00000449174 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 SMAD4Q13485 552 aaKnown RBP13.23□□□□□ -0.29
COPS7B-213ENST00000449174 ABHD15Q6UXT9 468 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 RTN4RL1Q86UN2 441 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-213ENST00000449174 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 AAASQ9NRG9 546 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 TBC1D22BQ9NU19 505 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 TCEAL9Q9UHQ7 104 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
COPS7B-213ENST00000449174 KLF18A0A0U1RQI7 1052 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 IPO5O00410 1097 aaKnown RBP13.22□□□□□ -0.29
COPS7B-213ENST00000449174 GPR182O15218 404 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 MBTPS2O43462 519 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 CCNE2O96020 404 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 KLRC1P26715 233 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 FGD1P98174 961 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 UBE3AQ05086 875 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-213ENST00000449174 PLA2G4DQ86XP0 818 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 SMAP1Q8IYB5 467 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-213ENST00000449174 SPPL3Q8TCT6 385 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 TRAPPC12Q8WVT3 735 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-213ENST00000449174 ZBTB10Q96DT7 871 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 PGBD1Q96JS3 809 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 TMX1Q9H3N1 280 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 C6orf50Q9HD87 102 aa13.22□□□□□ -0.29
COPS7B-213ENST00000449174 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
COPS7B-213ENST00000449174 CD207Q9UJ71 328 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms