RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MYH9P35579 1960 aaKnown RBP22.34■■□□□ 1.17
VCP-203ENST00000448530 PRRC2BQ5JSZ5 2229 aaKnown RBP22.33■■□□□ 1.17
VCP-203ENST00000448530 IGKV6D-21A0A0A0MT36 114 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 RBAK-RBAKDNI3L0D1 243 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 DHX15O43143 795 aaKnown RBP22.33■■□□□ 1.17
VCP-203ENST00000448530 HBP1O60381 514 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.17
VCP-203ENST00000448530 CDKL5O76039 1030 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 CIITAP33076 1130 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 ERVK-21P61565 698 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 KRT76Q01546 638 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 GRB10Q13322 594 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 LPIN1Q14693 890 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 SWSAP1Q6NVH7 229 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 SMAP1Q8IYB5 467 aaPredicted RBP22.33■■□□□ 1.17
VCP-203ENST00000448530 ATP8B4Q8TF62 1192 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 TRAPPC12Q8WVT3 735 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 TOP1MTQ969P6 601 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 ZBTB10Q96DT7 871 aa22.33■■□□□ 1.17
VCP-203ENST00000448530 SIP14410 1827 aa22.33■■□□□ 1.16
VCP-203ENST00000448530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.32■■□□□ 1.16
VCP-203ENST00000448530 PSAPP07602 524 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 USP11P51784 963 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 HTRA4P83105 476 aaPredicted RBP22.32■■□□□ 1.16
VCP-203ENST00000448530 FBXO47Q5MNV8 452 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 TSHZ1Q6ZSZ6 1077 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 SPRED2Q7Z698 418 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 CCDC60Q8IWA6 550 aaPredicted RBP22.32■■□□□ 1.16
VCP-203ENST00000448530 FAM177A1Q8N128 213 aaPredicted RBP22.32■■□□□ 1.16
VCP-203ENST00000448530 IL27Q8NEV9 243 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 PCDHA4Q9UN74 947 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 SAMM50Q9Y512 469 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 TRPV2Q9Y5S1 764 aa22.32■■□□□ 1.16
VCP-203ENST00000448530 COL4A4P53420 1690 aaPredicted RBP22.32■■□□□ 1.16
VCP-203ENST00000448530 COL1A2P08123 1366 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 SMIM35A0A1B0GVV1 85 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 ANAPC15P60006 121 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 MRPS5P82675 430 aaKnown RBP22.31■■□□□ 1.16
VCP-203ENST00000448530 ZNF484Q5JVG2 852 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 MTHFD1LQ6UB35 978 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 NME8Q8N427 588 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 GDPD5Q8WTR4 605 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 SLKQ9H2G2 1235 aaPredicted RBP22.31■■□□□ 1.16
VCP-203ENST00000448530 PCDHA10Q9Y5I2 948 aa22.31■■□□□ 1.16
VCP-203ENST00000448530 KLRC1P26715 233 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 TMEM62Q0P6H9 643 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 ANKRD1Q15327 319 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 GALNT17Q6IS24 598 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 BLIDQ8IZY5 108 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 FBXO22Q8NEZ5 403 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 SQORQ9Y6N5 450 aa22.3■■□□□ 1.16
VCP-203ENST00000448530 WDR64B1ANS9 1081 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 KRT40Q6A162 431 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 SP7Q8TDD2 431 aaPredicted RBP22.29■■□□□ 1.16
VCP-203ENST00000448530 TBCKQ8TEA7 893 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 SAMD11Q96NU1 681 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 ASB2Q96Q27 587 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 CELF4Q9BZC1 486 aaKnown RBP22.29■■□□□ 1.16
VCP-203ENST00000448530 SUGCTQ9HAC7 445 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 LMCD1Q9NZU5 365 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 LOXHD1Q8IVV2 1947 aa22.29■■□□□ 1.16
VCP-203ENST00000448530 GAS7O60861 476 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 XBP1P17861 261 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 CD52P31358 61 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 AAK1Q2M2I8 961 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 TRMT1LQ7Z2T5 733 aaKnown RBP22.28■■□□□ 1.16
VCP-203ENST00000448530 BBXQ8WY36 941 aaPredicted RBP22.28■■□□□ 1.16
VCP-203ENST00000448530 LENG9Q96B70 501 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 IL17RAQ96F46 866 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 RIT2Q99578 217 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 C17orf80Q9BSJ5 609 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 FTHL17Q9BXU8 183 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 GABBR1Q9UBS5 961 aa22.28■■□□□ 1.16
VCP-203ENST00000448530 MAFBQ9Y5Q3 323 aaPredicted RBP22.28■■□□□ 1.16
VCP-203ENST00000448530 MSH4O15457 936 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 LPXNO60711 386 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 SCRN1Q12765 414 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 PAK2Q13177 524 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 LRCH2Q5VUJ6 765 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 DAGLBQ8NCG7 672 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 EVPLQ92817 2033 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 FAM167AQ96KS9 214 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 TEKT3Q9BXF9 490 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 AGO3Q9H9G7 860 aaKnown RBP22.27■■□□□ 1.16
VCP-203ENST00000448530 CEP131Q9UPN4 1083 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 GINS2Q9Y248 185 aa22.27■■□□□ 1.16
VCP-203ENST00000448530 ENPP3O14638 875 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 PFKFB2O60825 505 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 SFNP31947 248 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 NONOQ15233 471 aaKnown RBP eCLIP22.26■■□□□ 1.15
VCP-203ENST00000448530 KRT25Q7Z3Z0 450 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 AIFM3Q96NN9 605 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 DISC1Q9NRI5 854 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 TPCN1Q9ULQ1 816 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 IGSF9BQ9UPX0 1349 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 KDM3AQ9Y4C1 1321 aa22.26■■□□□ 1.15
VCP-203ENST00000448530 WDR81Q562E7 1941 aa22.25■■□□□ 1.15
VCP-203ENST00000448530 CHMP2AO43633 222 aa22.25■■□□□ 1.15
VCP-203ENST00000448530 ATP4AP20648 1035 aa22.25■■□□□ 1.15
VCP-203ENST00000448530 JAK3P52333 1124 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms