RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 GIT1Q9Y2X7 761 aa1.85□□□□□ -2.11
SNHG3-203ENST00000447507 REXO2Q9Y3B8 237 aaKnown RBP1.85□□□□□ -2.11
SNHG3-203ENST00000447507 A0A1W2PQU0 124 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CAPN14A8MX76 684 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 FAM47E-STBD1D6RA91 191 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 ACOT7O00154 380 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 NKRFO15226 690 aaKnown RBP eCLIP1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CYP27B1O15528 508 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 DLX3O60479 287 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 RAMP2O60895 175 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 SOD2P04179 222 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 SSBP05455 408 aaKnown RBP eCLIP1.84□□□□□ -2.11
SNHG3-203ENST00000447507 ATF4P18848 351 aaPredicted RBP1.84□□□□□ -2.11
SNHG3-203ENST00000447507 KCNQ1P51787 676 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 GPR85P60893 370 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 IL13RA1P78552 427 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 FOXL1Q12952 345 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CRHR2Q13324 411 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 NOLC1Q14978 699 aaKnown RBP eCLIP1.84□□□□□ -2.113e-28■■■□□ 15
SNHG3-203ENST00000447507 TBR1Q16650 682 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 DPY19L2P1Q6NXN4 242 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 PCSK4Q6UW60 755 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 USP30Q70CQ3 517 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 OTOP2Q7RTS6 562 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 ADGRE4PQ86SQ3 457 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 DCAF4Q8WV16 495 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CFHR4Q92496 578 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 VOPP1Q96AW1 172 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CLIP3Q96DZ5 547 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 ALG1Q9BT22 464 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CD244Q9BZW8 370 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 ZDHHC5Q9C0B5 715 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 TGIF2Q9GZN2 237 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 NELFAQ9H3P2 528 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 ACBD3Q9H3P7 528 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 PARPBPQ9NWS1 579 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 PLA2G3Q9NZ20 509 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 CEP72Q9P209 647 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 PRKAG3Q9UGI9 489 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 DMRT1Q9Y5R6 373 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 MRVI1Q9Y6F6 885 aa1.84□□□□□ -2.11
SNHG3-203ENST00000447507 KRTAP23-1A1A580 65 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 GJB6O95452 261 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 PEX11BO96011 259 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 PTPN1P18031 435 aaKnown RBP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 PTGS1P23219 599 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 AOAHP28039 575 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 GJA4P35212 333 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 ADCY8P40145 1251 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 MRE11P49959 708 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 MEOX1P50221 254 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 HSP90AA2PQ14568 343 aaPredicted RBP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 GRM7Q14831 915 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 EIF4HQ15056 248 aaKnown RBP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 PCOLCEQ15113 449 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 FIGNQ5HY92 759 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 TMCO4Q5TGY1 634 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 BTBD8Q5XKL5 378 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 STYK1Q6J9G0 422 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 KCNT2Q6UVM3 1135 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 LARP4Q71RC2 724 aaKnown RBP eCLIP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 DPH6Q7L8W6 267 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 ZNF627Q7L945 461 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 CXXC5Q7LFL8 322 aaKnown RBP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 SGMS1Q86VZ5 419 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 TMPRSS6Q8IU80 811 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 RTKN2Q8IZC4 609 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 IFNL3Q8IZI9 196 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 NLGN4XQ8N0W4 816 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 THEMISQ8N1K5 641 aaPredicted RBP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 D2HGDHQ8N465 521 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 SHCBP1Q8NEM2 672 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 AARSD1Q9BTE6 412 aaKnown RBP1.83□□□□□ -2.12
SNHG3-203ENST00000447507 OR10A2Q9H208 303 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 IPPKQ9H8X2 491 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 CAPN10Q9HC96 672 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 INCENPQ9NQS7 918 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 RIC8BQ9NVN3 520 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 SRPK3Q9UPE1 567 aa1.83□□□□□ -2.12
SNHG3-203ENST00000447507 A0A0G2JNJ9 132 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.82□□□□□ -2.12
SNHG3-203ENST00000447507 PMS2P1A4D2B8 440 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 IQCA1LA6NCM1 817 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 TMEM191CA6NGB0 347 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 PRAMEF25A6NGN4 478 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 FAM90A27PA6NNH2 459 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 PRODHO43272 600 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 SLC26A4O43511 780 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 FGFR1P11362 822 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 PDE6AP16499 860 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 KRT4P19013 534 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 FBLP22087 321 aaKnown RBP1.82□□□□□ -2.12
SNHG3-203ENST00000447507 ZC3H6P61129 1189 aaKnown RBP1.82□□□□□ -2.12
SNHG3-203ENST00000447507 HGFACQ04756 655 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 STILQ15468 1287 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 GPR19Q15760 415 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 NTRK3Q16288 839 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 TMEM200BQ69YZ2 307 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 FILIP1Q7Z7B0 1213 aa1.82□□□□□ -2.12
SNHG3-203ENST00000447507 SCUBE1Q8IWY4 988 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms