RNA–Protein interactions for RNA: ENST00000446783.1

CHCHD3P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 3, humanhuman

BASIC

Gene CHCHD3P3, Length 640 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P3-201ENST00000446783 ZNF689Q96CS4 500 aaPredicted RBP13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CELF4Q9BZC1 486 aaKnown RBP13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 RC3H2Q9HBD1 1191 aaKnown RBP13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 PADI3Q9ULW8 664 aa13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 SQORQ9Y6N5 450 aa13.04□□□□□ -0.32
CHCHD3P3-201ENST00000446783 REV3LO60673 3130 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 PI4K2BG5E9Z4 385 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 BACH1O14867 736 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CDC45O75419 566 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CCNE2O96020 404 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CPA1P15085 419 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 KLRC1P26715 233 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CLK2P49760 499 aaKnown RBP13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 ABHD15Q6UXT9 468 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 NME8Q8N427 588 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 UIMC1Q96RL1 719 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 FTHL17Q9BXU8 183 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 LMAN2LQ9H0V9 348 aa13.03□□□□□ -0.32
CHCHD3P3-201ENST00000446783 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 FAM86C2PA6NEL3 165 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 NCK2O43639 380 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 HBP1O60381 514 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CSPG5O95196 566 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 STAG3L1P0CL83 205 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 SLC26A2P50443 739 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 KRT76Q01546 638 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 APOBRQ0VD83 1088 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PAK2Q13177 524 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PFKFB3Q16875 520 aaPredicted RBP13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 SWSAP1Q6NVH7 229 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 FAM122AQ96E09 287 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 GINS2Q9Y248 185 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 MUC3AQ02505 3323 aa13.02□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CCDC196A0A1B0GTZ2 297 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 FAM86B1E9PN63 330 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 GPR37L1O60883 481 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CYP3A4P08684 503 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 FAM86B2P0C5J1 330 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 SCG2P13521 617 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 RCAN1P53805 252 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 HYAL1Q12794 435 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 COL19A1Q14993 1142 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 TMEM266Q2M3C6 531 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PAN2Q504Q3 1202 aaKnown RBP13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 MIS18BP1Q6P0N0 1132 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 Q6ZUG5 572 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ATP8B4Q8TF62 1192 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 IGFLR1Q9H665 355 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CDHR5Q9HBB8 845 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 FAM50BQ9Y247 325 aa13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 MRPL42Q9Y6G3 142 aaKnown RBP13.01□□□□□ -0.33
CHCHD3P3-201ENST00000446783 TTC3P53804 2025 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 COL4A6Q14031 1691 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 KDM3AQ9Y4C1 1321 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 IPO5O00410 1097 aaKnown RBP13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ADAMTS3O15072 1205 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ATP4AP20648 1035 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 LTBRP36941 435 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 PLA2G5P39877 138 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 GATMP50440 423 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 TRMT1LQ7Z2T5 733 aaKnown RBP13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CKAP2LQ8IYA6 745 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 KIAA0319LQ8IZA0 1049 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 CRIPAKQ8N1N5 446 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 BRF1Q92994 677 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 P2RX5Q93086 422 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 JAKMIP1Q96N16 626 aaKnown RBP13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ZNF577Q9BSK1 485 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 C6orf50Q9HD87 102 aa13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 NOC2LQ9Y3T9 749 aaKnown RBP13□□□□□ -0.33
CHCHD3P3-201ENST00000446783 IGLV3-22A0A075B6J6 115 aa12.99□□□□□ -0.33
CHCHD3P3-201ENST00000446783 ESYT2A0FGR8 921 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms