RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MAN2A1Q16706 1144 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 USH1GQ495M9 461 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 CCDC84Q86UT8 332 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 REXO1L1PQ8IX06 675 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 MYOCDQ8IZQ8 938 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 ANKRD7Q92527 254 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 ZNF592Q92610 1267 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 DDX12PQ92771 950 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 LENG9Q96B70 501 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TEPSINQ96N21 525 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 PLIN2Q99541 437 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 DNAJC7Q99615 494 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 FEZ1Q99689 392 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 DUSP9Q99956 384 aaKnown RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TUBGCP2Q9BSJ2 902 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 POLR3CQ9BUI4 534 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TUBB2BQ9BVA1 445 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 WDR11Q9BZH6 1224 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TUFT1Q9NNX1 390 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 CGNQ9P2M7 1197 aaKnown RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 CSADQ9Y600 493 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 SNCAIPQ9Y6H5 919 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 A0A0G2JMZ2 1700 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 DOCK3Q8IZD9 2030 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 KIF5CO60282 957 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 IPO7O95373 1038 aaKnown RBP10.11□□□□□ -0.79
HDAC6-209ENST00000440653 PLA2G4BP0C869 781 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 IDEP14735 1019 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 USP14P54578 494 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 MRPS5P82675 430 aaKnown RBP10.11□□□□□ -0.79
HDAC6-209ENST00000440653 CDK17Q00537 523 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 PPP2R3AQ06190 1150 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 SHROOM1Q2M3G4 852 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-209ENST00000440653 EDRF1Q3B7T1 1238 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 PRR16Q569H4 304 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 TMEM31Q5JXX7 168 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 FAM83BQ5T0W9 1011 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 DCAF15Q66K64 600 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 SYT10Q6XYQ8 523 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 NIPA1Q7RTP0 329 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 GPBP1Q86WP2 473 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 IRF2BP1Q8IU81 584 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 TXLNBQ8N3L3 684 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 ZNF397Q8NF99 534 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-209ENST00000440653 ZNF507Q8TCN5 953 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 LBHD1Q9BQE6 289 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-209ENST00000440653 MAF1Q9H063 256 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 VPS16Q9H269 839 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 PDCL3Q9H2J4 239 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 C11orf16Q9NQ32 467 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 KCND2Q9NZV8 630 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 THEGQ9P2T0 379 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 CAPN11Q9UMQ6 739 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 LUC7L2Q9Y383 392 aaKnown RBP10.11□□□□□ -0.79
HDAC6-209ENST00000440653 MYH11P35749 1972 aa10.11□□□□□ -0.79
HDAC6-209ENST00000440653 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 FAM86C2PA6NEL3 165 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 OPLAHO14841 1288 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 TBCAO75347 108 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ICAM1P05362 532 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 KRT18P05783 430 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 CYP2C8P10632 490 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 FCER1AP12319 257 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 GAP43P17677 238 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 TRIM21P19474 475 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 KRT9P35527 623 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 CYLC1P35663 651 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ZNF76P36508 570 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 PMS1P54277 932 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 TUBB4BP68371 445 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 SMAD3P84022 425 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ZBED6P86452 979 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 FKBP3Q00688 224 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 NCBP1Q09161 790 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 PPP2R5CQ13362 524 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 IRF5Q13568 498 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 RRP1BQ14684 758 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 MEA1Q16626 185 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ZCWPW2Q504Y3 356 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ARHGAP29Q52LW3 1261 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 POTEEQ6S8J3 1075 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ZNF662Q6ZS27 426 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 LRRC55Q6ZSA7 311 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 TOGARAM2Q6ZUX3 1019 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ANKRD23Q86SG2 305 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ERO1BQ86YB8 467 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 MCF2L2Q86YR7 1114 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ZC3H3Q8IXZ2 948 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 OR8K1Q8NGG5 319 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ZKSCAN4Q969J2 545 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 DNAJC19Q96DA6 116 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 NOC4LQ9BVI4 516 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms