RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 LIMA1Q9UHB6 759 aaKnown RBP16.63■□□□□ 0.25
CPSF7-205ENST00000439958 SOWAHDA6NJG2 315 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 CXCL11O14625 94 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 MARK3P27448 753 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 GJA5P36382 358 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
CPSF7-205ENST00000439958 PPIL2Q13356 520 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 CENPPQ6IPU0 288 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 GBA2Q9HCG7 927 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-205ENST00000439958 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 PPP1R2P41236 205 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 PTPN14Q15678 1187 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 MTERF2Q49AM1 385 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 APTXQ7Z2E3 356 aaKnown RBP16.63■□□□□ 0.25
CPSF7-205ENST00000439958 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.255e-7■■■■■ 44.9
CPSF7-205ENST00000439958 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 CETN3O15182 167 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 DHX15O43143 795 aaKnown RBP16.62■□□□□ 0.25
CPSF7-205ENST00000439958 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-205ENST00000439958 LGALS16A8MUM7 142 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 PEX3P56589 373 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 KRT76Q01546 638 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 ARID5AQ03989 594 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 CHST13Q8NET6 341 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 MMP19Q99542 508 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 PCDHA10Q9Y5I2 948 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.62■□□□□ 0.254e-11■■□□□ 12.6
CPSF7-205ENST00000439958 HUNKP57058 714 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 PORCNQ9H237 461 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 PCIF1Q9H4Z3 704 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 FBXO40Q9UH90 709 aa16.62■□□□□ 0.25
CPSF7-205ENST00000439958 DCAF8L1A6NGE4 600 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 PDHXO00330 501 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 GYPCP04921 128 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 LRRC63Q05C16 580 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 LZTFL1Q9NQ48 299 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 LUC7L2Q9Y383 392 aaKnown RBP16.61■□□□□ 0.25
CPSF7-205ENST00000439958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.61■□□□□ 0.25
CPSF7-205ENST00000439958 OFD1O75665 1012 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 IVNS1ABPQ9Y6Y0 642 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 NOP56O00567 594 aaKnown RBP16.61■□□□□ 0.25
CPSF7-205ENST00000439958 RGS20O76081 388 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 BCRP11274 1271 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-205ENST00000439958 PSMC5P62195 406 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 HS2ST1Q7LGA3 356 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 FBXO16Q8IX29 292 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-205ENST00000439958 GLG1Q92896 1179 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 NDST4Q9H3R1 872 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 MAP3K20Q9NYL2 800 aaKnown RBP16.61■□□□□ 0.25
CPSF7-205ENST00000439958 RBPJLQ9UBG7 517 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 ADAMTS5Q9UNA0 930 aa16.61■□□□□ 0.25
CPSF7-205ENST00000439958 DNM2P50570 870 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 ACTR2P61160 394 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 KNOP1Q1ED39 458 aaKnown RBP16.6■□□□□ 0.25
CPSF7-205ENST00000439958 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 GTPBP4Q9BZE4 634 aaKnown RBP16.6■□□□□ 0.25
CPSF7-205ENST00000439958 TTC26A0AVF1 554 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 RNF225M0QZC1 329 aaPredicted RBP16.6■□□□□ 0.25
CPSF7-205ENST00000439958 SLC16A4O15374 487 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 JAK3P52333 1124 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 RIOX2Q8IUF8 465 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 CCDC112Q8NEF3 446 aa16.6■□□□□ 0.25
CPSF7-205ENST00000439958 LARSQ9P2J5 1176 aaKnown RBP16.6■□□□□ 0.25
CPSF7-205ENST00000439958 RARRES1P49788 294 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 SP2Q02086 613 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 SEMA3FQ13275 785 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 CNGA4Q8IV77 575 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 CCAR2Q8N163 923 aaKnown RBP16.59■□□□□ 0.25
CPSF7-205ENST00000439958 DICER1Q9UPY3 1922 aaKnown RBP16.59■□□□□ 0.25
CPSF7-205ENST00000439958 E4F1Q66K89 784 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-205ENST00000439958 CCDC60Q8IWA6 550 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-205ENST00000439958 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-205ENST00000439958 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-205ENST00000439958 AGPAT5Q9NUQ2 364 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 TISP43B9A030 160 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 MFAP3LO75121 409 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 GGPS1O95749 300 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 PSAPP07602 524 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 CASP4P49662 377 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 APBA1Q02410 837 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 VWA3BQ502W6 1294 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 ATP6V0A1Q93050 837 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
CPSF7-205ENST00000439958 PFASO15067 1338 aa16.58■□□□□ 0.25
CPSF7-205ENST00000439958 EIF3JO75822 258 aaKnown RBP16.58■□□□□ 0.25
CPSF7-205ENST00000439958 ZNHIT6Q9NWK9 470 aaKnown RBP16.58■□□□□ 0.25
CPSF7-205ENST00000439958 CALUO43852 315 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-205ENST00000439958 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms