RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TEAD4Q15561 434 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 IL17AQ16552 155 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 UBE2SQ16763 222 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ANO6Q4KMQ2 910 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 SPECC1Q5M775 1068 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 NT5DC1Q5TFE4 455 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PRAMEF18Q5VWM3 479 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 RRAGBQ5VZM2 374 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 KRT79Q5XKE5 535 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PHLDB3Q6NSJ2 640 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 XRRA1Q6P2D8 792 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 FASTKD5Q7L8L6 764 aaKnown RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CABP7Q86V35 215 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ERO1BQ86YB8 467 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PDILTQ8N807 584 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 MB21D1Q8N884 522 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 IGSF22Q8N9C0 903 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 MLKLQ8NB16 471 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZDHHC1Q8WTX9 485 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CRYGNQ8WXF5 182 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 SMARCE1Q969G3 411 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CCDC47Q96A33 483 aaKnown RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 DHX58Q96C10 678 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CDCA5Q96FF9 252 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 EPSTI1Q96J88 318 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CDK5RAP3Q96JB5 506 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 GSDMAQ96QA5 445 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 BPIFA3Q9BQP9 254 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PANK2Q9BZ23 570 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 TMEM60Q9H2L4 133 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 FBXO28Q9NVF7 368 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 RMND1Q9NWS8 449 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CXXC1Q9P0U4 656 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 LRWD1Q9UFC0 647 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 DDX25Q9UHL0 483 aaKnown RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PCDHA12Q9UN75 941 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ADAMTS5Q9UNA0 930 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZNF232Q9UNY5 417 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 AFG3L2Q9Y4W6 797 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 MRVI1Q9Y6F6 885 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 SNCAIPQ9Y6H5 919 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PTPRFP10586 1907 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 RLFQ13129 1914 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 OTOFQ9HC10 1997 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 PAPPA2Q9BXP8 1791 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SSC5DA1L4H1 1573 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 COL11A1P12107 1806 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 A0A0G2JLL6 359 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SERTM1A2A2V5 107 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SMTNL1A8MU46 457 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 OPLAHO14841 1288 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 IKBKBO14920 756 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 ATP2A1O14983 1001 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 TDP2O95551 362 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 CFBP00751 764 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 ALAS1P13196 640 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 WEE1P30291 646 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 HOXA13P31271 388 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 NOS2P35228 1153 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 COPB2P35606 906 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 TECP42680 631 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SARSP49591 514 aaKnown RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 PSMA6P60900 246 aaKnown RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SETQ01105 290 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 GRIN1Q05586 938 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 PNOCQ13519 176 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 NAA30Q147X3 362 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 CEP55Q53EZ4 464 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 EAPPQ56P03 285 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 LDLRAD1Q5T700 205 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 CATSPERGQ6ZRH7 1159 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SV2BQ7L1I2 683 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 NIPA1Q7RTP0 329 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 PRRT2Q7Z6L0 340 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 CCDC84Q86UT8 332 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 FCHSD1Q86WN1 690 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZNF295-AS1Q8N0V1 137 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 CCDC155Q8N6L0 562 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 RNF214Q8ND24 703 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 ERMNQ8TAM6 284 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SPATA20Q8TB22 786 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 PAGE5Q96GU1 130 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 TRERF1Q96PN7 1200 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 PPP1R9BQ96SB3 815 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 TRAIPQ9BWF2 469 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 TEX13BQ9BXU2 312 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 NT5C3AQ9H0P0 336 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 DNAJC25Q9H1X3 360 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 TTC12Q9H892 705 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 CBX8Q9HC52 389 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 GPAMQ9HCL2 828 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 KCNMB3Q9NPA1 279 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 DISC1Q9NRI5 854 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 NXF1Q9UBU9 619 aaKnown RBP4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 STK17AQ9UEE5 414 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 SEPT3Q9UH03 358 aa4.45□□□□□ -1.7
HMGB1P37-201ENST00000439613 FBXO40Q9UH90 709 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms