RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 EYA4O95677 639 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 F2P00734 622 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 OATP04181 439 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 MYL1P05976 194 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 C6orf222P0C671 652 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-202ENST00000439369 CCL5P13501 91 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 CTTNQ14247 550 aaKnown RBP14.17□□□□□ -0.14
SCLT1-202ENST00000439369 NAALADL2Q58DX5 795 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 ARRDC4Q8NCT1 418 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 ATP8B4Q8TF62 1192 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 LARP4BQ92615 738 aaKnown RBP14.17□□□□□ -0.14
SCLT1-202ENST00000439369 RAD54LQ92698 747 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 GLG1Q92896 1179 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 LENG1Q96BZ8 264 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-202ENST00000439369 DHX58Q96C10 678 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 C16orf70Q9BSU1 422 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 TSEN34Q9BSV6 310 aaKnown RBP14.17□□□□□ -0.14
SCLT1-202ENST00000439369 KATNAL1Q9BW62 490 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 TNMDQ9H2S6 317 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 NRBP2Q9NSY0 501 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 BLOC1S4Q9NUP1 217 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 DACT1Q9NYF0 836 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 KCND2Q9NZV8 630 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 TELO2Q9Y4R8 837 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 LOXHD1Q8IVV2 1947 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 CABYRO75952 493 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 YWHABP31946 246 aaKnown RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 AMPD3Q01432 767 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 PRKCEQ02156 737 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 ZRSR1Q15695 479 aaKnown RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 ECM1Q16610 540 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 UGCGQ16739 394 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 CCSAPQ6IQ19 270 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 EXOC8Q8IYI6 725 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 PDILTQ8N807 584 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 CNNM3Q8NE01 707 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 BBXQ8WY36 941 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 NIFKQ9BYG3 293 aaKnown RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 UNC93B1Q9H1C4 597 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 KBTBD4Q9NVX7 518 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 WRAP73Q9P2S5 460 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-202ENST00000439369 COL1A2P08123 1366 aa14.16□□□□□ -0.14
SCLT1-202ENST00000439369 MOXD2PA6NHM9 499 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 H3BRB1 525 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 HAS3O00219 553 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 HBP1O60381 514 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 STBD1O95210 358 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 PGK1P00558 417 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 PURAQ00577 322 aaKnown RBP14.15□□□□□ -0.14
SCLT1-202ENST00000439369 UTP14CQ5TAP6 766 aaKnown RBP14.15□□□□□ -0.14
SCLT1-202ENST00000439369 CNNM4Q6P4Q7 775 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 SV2BQ7L1I2 683 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 CKAP2LQ8IYA6 745 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 SYT2Q8N9I0 419 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-202ENST00000439369 MTG1Q9BT17 334 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-202ENST00000439369 TIPINQ9BVW5 301 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 PANK2Q9BZ23 570 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 RNF208Q9H0X6 261 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 TUT1Q9H6E5 874 aaKnown RBP14.15□□□□□ -0.14
SCLT1-202ENST00000439369 SERTAD1Q9UHV2 236 aa14.15□□□□□ -0.14
SCLT1-202ENST00000439369 ARHGEF35A5YM69 484 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 TRAK2O60296 914 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 GJB1P08034 283 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 PLA2G4BP0C869 781 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 ATP4AP20648 1035 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 PTGS1P23219 599 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 RARRES1P49788 294 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 SLC12A3P55017 1021 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 PLCB4Q15147 1175 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 LRRC41Q15345 812 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 ZNF484Q5JVG2 852 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 ANO5Q75V66 913 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 KCNK18Q7Z418 384 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 SH3RF1Q7Z6J0 888 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 PIGOQ8TEQ8 1089 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 CCDC43Q96MW1 224 aaKnown RBP14.14□□□□□ -0.15
SCLT1-202ENST00000439369 SEZ6LQ9BYH1 1024 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 CLSTN2Q9H4D0 955 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 CEP350Q5VT06 3117 aa14.14□□□□□ -0.15
SCLT1-202ENST00000439369 FRMPD3Q5JV73 1810 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 MYADML2A6NDP7 307 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 RRN3P2A6NIE6 340 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 E9PMD0 336 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 DNM1LO00429 736 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 GAS2O43903 313 aaKnown RBP14.13□□□□□ -0.15
SCLT1-202ENST00000439369 MYL3P08590 195 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 ZNF286BP0CG31 522 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 RFC5P40937 340 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 PSEN2P49810 448 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 PSMC6P62333 389 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 BEX3Q00994 111 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 MTFR1Q15390 333 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms