RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PCDHB12Q9Y5F1 795 aa12.97□□□□□ -0.33
CSTF3-203ENST00000438862 DMXL1Q9Y485 3027 aa12.97□□□□□ -0.33
CSTF3-203ENST00000438862 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
CSTF3-203ENST00000438862 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 SORBS3O60504 671 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 CFBP00751 764 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.33
CSTF3-203ENST00000438862 TECP42680 631 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 ARHGAP4P98171 946 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
CSTF3-203ENST00000438862 ANGPT1Q15389 498 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
CSTF3-203ENST00000438862 ZMYM1Q5SVZ6 1142 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 SYCE2Q6PIF2 218 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 PANK1Q8TE04 598 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 PDCD2LQ9BRP1 358 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 DLL3Q9NYJ7 618 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
CSTF3-203ENST00000438862 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
CSTF3-203ENST00000438862 EP300Q09472 2414 aaPredicted RBP12.96□□□□□ -0.34
CSTF3-203ENST00000438862 AOC1P19801 751 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 SP100P23497 879 aaPredicted RBP12.95□□□□□ -0.34
CSTF3-203ENST00000438862 HSD17B4P51659 736 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 MGAT3Q09327 533 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 TSHZ1Q6ZSZ6 1077 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 CCDC105Q8IYK2 499 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 SQORQ9Y6N5 450 aa12.95□□□□□ -0.34
CSTF3-203ENST00000438862 C2CD4DB7Z1M9 353 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
CSTF3-203ENST00000438862 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
CSTF3-203ENST00000438862 GOLGA8HP0CJ92 632 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 ERVFC1P60507 584 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 GHRHRQ02643 423 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 ITIH3Q06033 890 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 NEDD9Q14511 834 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 PGM5Q15124 567 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 TPRNQ4KMQ1 711 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
CSTF3-203ENST00000438862 RRP12Q5JTH9 1297 aaKnown RBP12.94□□□□□ -0.34
CSTF3-203ENST00000438862 FAM43BQ6ZT52 329 aaPredicted RBP12.94□□□□□ -0.34
CSTF3-203ENST00000438862 RTN4RL1Q86UN2 441 aaPredicted RBP12.94□□□□□ -0.34
CSTF3-203ENST00000438862 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 MYH6P13533 1939 aa12.94□□□□□ -0.34
CSTF3-203ENST00000438862 FSCN2O14926 492 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 FOXP2O15409 715 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 FGF18O76093 207 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 NEFLP07196 543 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 CCND2P30279 289 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 ALX1Q15699 326 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 DTWD2Q8NBA8 298 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 APOL5Q9BWW9 433 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 CPVLQ9H3G5 476 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 LRFN2Q9ULH4 789 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 TPRP12270 2363 aaKnown RBP12.93□□□□□ -0.34
CSTF3-203ENST00000438862 NCOR2Q9Y618 2525 aa12.93□□□□□ -0.34
CSTF3-203ENST00000438862 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
CSTF3-203ENST00000438862 SCG2P13521 617 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 SDHBP21912 280 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 CD52P31358 61 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 MTHFRP42898 656 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 GNPTABQ3T906 1256 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 SPOUT1Q5T280 376 aaKnown RBP12.92□□□□□ -0.34
CSTF3-203ENST00000438862 CWF19L1Q69YN2 538 aaKnown RBP12.92□□□□□ -0.34
CSTF3-203ENST00000438862 CASP10Q92851 521 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 GPR20Q99678 358 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 AMNQ9BXJ7 453 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 POMKQ9H5K3 350 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
CSTF3-203ENST00000438862 NGRNQ9NPE2 291 aaKnown RBP12.92□□□□□ -0.34
CSTF3-203ENST00000438862 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
CSTF3-203ENST00000438862 CDY2AQ9Y6F7 541 aa12.92□□□□□ -0.34
CSTF3-203ENST00000438862 PI15O43692 258 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 STAM2O75886 525 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 ASPRV1Q53RT3 343 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 IER5Q5VY09 327 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 LLGL2Q6P1M3 1020 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 CYFIP1Q7L576 1253 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms