RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.25
TMEM116-202ENST00000437003 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
TMEM116-202ENST00000437003 RNF14Q9UBS8 474 aa13.52□□□□□ -0.25
TMEM116-202ENST00000437003 H0YGN5 161 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 C6orf229H3BNL8 230 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
TMEM116-202ENST00000437003 CLTAP09496 248 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 ECHS1P30084 290 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 CDC25CP30307 473 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 ASTE1Q2TB18 679 aaPredicted RBP13.51□□□□□ -0.25
TMEM116-202ENST00000437003 KRT71Q3SY84 523 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 RNF10Q8N5U6 811 aaKnown RBP13.51□□□□□ -0.25
TMEM116-202ENST00000437003 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 SNX29Q8TEQ0 813 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 TBC1D5Q92609 795 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 LARP4BQ92615 738 aaKnown RBP13.51□□□□□ -0.25
TMEM116-202ENST00000437003 RBM17Q96I25 401 aaKnown RBP13.51□□□□□ -0.25
TMEM116-202ENST00000437003 DDX47Q9H0S4 455 aaKnown RBP13.51□□□□□ -0.25
TMEM116-202ENST00000437003 KANSL2Q9H9L4 492 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 ATP6V0A4Q9HBG4 840 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 NOD2Q9HC29 1040 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 TBC1D7Q9P0N9 293 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 NFS1Q9Y697 457 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 SLC8A1P32418 973 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 MAN2A1Q16706 1144 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 KIAA0753Q2KHM9 967 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 TATDN2Q93075 761 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 BLOC1S4Q9NUP1 217 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 POLLQ9UGP5 575 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 L3MBTL1Q9Y468 752 aa13.51□□□□□ -0.25
TMEM116-202ENST00000437003 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-202ENST00000437003 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-202ENST00000437003 CEP104O60308 925 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 MARCH6O60337 910 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 ATP6V1G2O95670 118 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 SERPINB2P05120 415 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-202ENST00000437003 XRCC4Q13426 336 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 UBE2SQ16763 222 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-202ENST00000437003 TAF4BQ92750 862 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 SLC9C1Q4G0N8 1177 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 KCNK18Q7Z418 384 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 CERKQ8TCT0 537 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 CCT6BQ92526 530 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-202ENST00000437003 ADAMTS1Q9UHI8 967 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 TAF1LQ8IZX4 1826 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
TMEM116-202ENST00000437003 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
TMEM116-202ENST00000437003 DAPK3O43293 454 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 MGRN1O60291 552 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 TLR2O60603 784 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 PEX19P40855 299 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 CCNHP51946 323 aaPredicted RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 MYBPC2Q14324 1141 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 CENPPQ6IPU0 288 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 LRIG3Q6UXM1 1119 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 C1orf131Q8NDD1 294 aaKnown RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 NSMCE1Q8WV22 266 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 DDX12PQ92771 950 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 PNMA5Q96PV4 448 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 TRIM31Q9BZY9 425 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 A0A087X0T9 212 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 GRID2IPA4D2P6 1211 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 SRRM3A6NNA2 597 aaPredicted RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 BBOX1O75936 387 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 FAM228BP0C875 321 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 POLR2FP61218 127 aaKnown RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 GTF2IP78347 998 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 RAPGEF1Q13905 1077 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 NAB2Q15742 525 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 TBC1D1Q86TI0 1168 aaPredicted RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 RSRC1Q96IZ7 334 aaKnown RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 RIOX1Q9H6W3 641 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 MTMR4Q9NYA4 1195 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 CTNND1O60716 968 aaKnown RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 RTN2O75298 545 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 GYS1P13807 737 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 DRD4P21917 467 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 ADCY7P51828 1080 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 IFFO1Q0D2I5 559 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 BIRC3Q13489 604 aa13.49□□□□□ -0.25
TMEM116-202ENST00000437003 FAM133BQ5BKY9 247 aaKnown RBP13.49□□□□□ -0.25
TMEM116-202ENST00000437003 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms