RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 GBA2Q9HCG7 927 aaPredicted RBP23.37■■□□□ 1.33
PTPRF-207ENST00000436724 RIOK3O14730 519 aaKnown RBP23.36■■□□□ 1.33
PTPRF-207ENST00000436724 PRPF6O94906 941 aaKnown RBP23.36■■□□□ 1.33
PTPRF-207ENST00000436724 FAM13AO94988 1023 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 CELF2O95319 508 aaKnown RBP23.36■■□□□ 1.33
PTPRF-207ENST00000436724 HOXD13P35453 343 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 MTIF2P46199 727 aaKnown RBP23.36■■□□□ 1.33
PTPRF-207ENST00000436724 JAK3P52333 1124 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 RBL2Q08999 1139 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 FAM114A1Q8IWE2 563 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 MYCT1Q8N699 235 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 ZNF526Q8TF50 670 aaPredicted RBP23.36■■□□□ 1.33
PTPRF-207ENST00000436724 MS4A4AQ96JQ5 239 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 TSG101Q99816 390 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 NMRK2Q9NPI5 230 aa23.36■■□□□ 1.33
PTPRF-207ENST00000436724 LGALS16A8MUM7 142 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 SPATA31C2B4DYI2 1134 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 GNPTABQ3T906 1256 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 PADI6Q6TGC4 694 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 SEPT14Q6ZU15 432 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 EPM2AIP1Q7L775 607 aaPredicted RBP23.35■■□□□ 1.33
PTPRF-207ENST00000436724 ZNF710Q8N1W2 664 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 EIF3JO75822 258 aaKnown RBP23.35■■□□□ 1.33
PTPRF-207ENST00000436724 STAM2O75886 525 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 GCNT3O95395 438 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 YWHABP31946 246 aaKnown RBP23.35■■□□□ 1.33
PTPRF-207ENST00000436724 SFNP31947 248 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 RARRES1P49788 294 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 KCNA1Q09470 495 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 WDR78Q5VTH9 848 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 ZNF746Q6NUN9 644 aaPredicted RBP23.35■■□□□ 1.33
PTPRF-207ENST00000436724 FAM133AQ8N9E0 248 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 ZNF507Q8TCN5 953 aa23.35■■□□□ 1.33
PTPRF-207ENST00000436724 USP27XA6NNY8 438 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 GYPCP04921 128 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 NMT1P30419 496 aaKnown RBP23.34■■□□□ 1.33
PTPRF-207ENST00000436724 MIIPQ5JXC2 388 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 MTERF4Q7Z6M4 381 aaKnown RBP23.34■■□□□ 1.33
PTPRF-207ENST00000436724 PARVGQ9HBI0 331 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 JPH1Q9HDC5 661 aaPredicted RBP23.34■■□□□ 1.33
PTPRF-207ENST00000436724 PCDHA10Q9Y5I2 948 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 SLC25A27O95847 323 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 PSMC5P62195 406 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 DAW1Q8N136 415 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 CDHR1Q96JP9 859 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 NOC4LQ9BVI4 516 aaKnown RBP23.34■■□□□ 1.33
PTPRF-207ENST00000436724 TMX1Q9H3N1 280 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 OLFML3Q9NRN5 406 aa23.34■■□□□ 1.33
PTPRF-207ENST00000436724 HIP1RO75146 1068 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 LYPLA2O95372 231 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 CASP14P31944 242 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 FXR1P51114 621 aaKnown RBP eCLIP23.33■■□□□ 1.33
PTPRF-207ENST00000436724 FKBP3Q00688 224 aaKnown RBP23.33■■□□□ 1.33
PTPRF-207ENST00000436724 ZC2HC1CQ53FD0 456 aaPredicted RBP23.33■■□□□ 1.33
PTPRF-207ENST00000436724 PLA2G4FQ68DD2 849 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 EEPD1Q7L9B9 569 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 TMEM139Q8IV31 216 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 C4orf19Q8IY42 314 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 PORCNQ9H237 461 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 IKZF4Q9H2S9 585 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 SLC9A2Q9UBY0 812 aa23.33■■□□□ 1.33
PTPRF-207ENST00000436724 LOXHD1Q8IVV2 1947 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 CCL15-CCL14A0A0B4J2E2 113 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 BTBD19C9JJ37 291 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 RNF225M0QZC1 329 aaPredicted RBP23.33■■□□□ 1.32
PTPRF-207ENST00000436724 PDHXO00330 501 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 KIF20AO95235 890 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 GAP43P17677 238 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 GUCY2CP25092 1073 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 ZNF131P52739 623 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 ERVK-9P63128 1117 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 ERVK-24P63145 666 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 MAPK7Q13164 816 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 CCL15Q16663 113 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 PPFIBP1Q86W92 1011 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 FIZ1Q96SL8 496 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 SENP7Q9BQF6 1050 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 KCND2Q9NZV8 630 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 GABBR1Q9UBS5 961 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 DBR1Q9UK59 544 aaKnown RBP23.33■■□□□ 1.32
PTPRF-207ENST00000436724 ITIH6Q6UXX5 1313 aa23.33■■□□□ 1.32
PTPRF-207ENST00000436724 WDR81Q562E7 1941 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 AKR1B15C9JRZ8 316 aaPredicted RBP23.32■■□□□ 1.32
PTPRF-207ENST00000436724 USO1O60763 962 aaKnown RBP23.32■■□□□ 1.32
PTPRF-207ENST00000436724 EDNRBP24530 442 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 NPEPPSP55786 919 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 KNOP1Q1ED39 458 aaKnown RBP23.32■■□□□ 1.32
PTPRF-207ENST00000436724 CYFIP1Q7L576 1253 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 KSR1Q8IVT5 923 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 SMCR8Q8TEV9 937 aaPredicted RBP23.32■■□□□ 1.32
PTPRF-207ENST00000436724 BRI3BPQ8WY22 251 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 C16orf45Q96MC5 204 aaPredicted RBP23.32■■□□□ 1.32
PTPRF-207ENST00000436724 ODF2LQ9ULJ1 636 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 MYH11P35749 1972 aa23.32■■□□□ 1.32
PTPRF-207ENST00000436724 NFASCO94856 1347 aa23.31■■□□□ 1.32
PTPRF-207ENST00000436724 UNCXA6NJT0 531 aa23.31■■□□□ 1.32
PTPRF-207ENST00000436724 BACH1O14867 736 aa23.31■■□□□ 1.32
PTPRF-207ENST00000436724 ZNF862O60290 1169 aa23.31■■□□□ 1.32
PTPRF-207ENST00000436724 ACTR2P61160 394 aa23.31■■□□□ 1.32
PTPRF-207ENST00000436724 ODR4Q5SWX8 454 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms