RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 GTPBP6O43824 516 aaPredicted RBP23.83■■□□□ 1.41
YBX1-203ENST00000436427 LYPLA2O95372 231 aa23.83■■□□□ 1.41
YBX1-203ENST00000436427 YWHABP31946 246 aaKnown RBP23.83■■□□□ 1.41
YBX1-203ENST00000436427 RBM43Q6ZSC3 357 aaKnown RBP23.83■■□□□ 1.41
YBX1-203ENST00000436427 SLAIN1Q8ND83 568 aa23.83■■□□□ 1.41
YBX1-203ENST00000436427 GLG1Q92896 1179 aa23.83■■□□□ 1.41
YBX1-203ENST00000436427 KIAA1468Q9P260 1216 aa23.83■■□□□ 1.41
YBX1-203ENST00000436427 PTCH2Q9Y6C5 1203 aa23.83■■□□□ 1.41
YBX1-203ENST00000436427 STAT5BP51692 787 aa23.82■■□□□ 1.4
YBX1-203ENST00000436427 PRKCEQ02156 737 aa23.82■■□□□ 1.4
YBX1-203ENST00000436427 CUL4BQ13620 913 aa23.82■■□□□ 1.4
YBX1-203ENST00000436427 CCDC43Q96MW1 224 aaKnown RBP23.82■■□□□ 1.4
YBX1-203ENST00000436427 PCYT2Q99447 389 aa23.82■■□□□ 1.4
YBX1-203ENST00000436427 LRRC27Q9C0I9 530 aa23.82■■□□□ 1.4
YBX1-203ENST00000436427 MAFBQ9Y5Q3 323 aaPredicted RBP23.82■■□□□ 1.4
YBX1-203ENST00000436427 ZNF862O60290 1169 aa23.81■■□□□ 1.4
YBX1-203ENST00000436427 SLC12A3P55017 1021 aa23.81■■□□□ 1.4
YBX1-203ENST00000436427 GPBP1Q86WP2 473 aa23.81■■□□□ 1.4
YBX1-203ENST00000436427 SYT2Q8N9I0 419 aaPredicted RBP23.81■■□□□ 1.4
YBX1-203ENST00000436427 AFAP1L1Q8TED9 768 aa23.81■■□□□ 1.4
YBX1-203ENST00000436427 SMARCE1Q969G3 411 aa23.81■■□□□ 1.4
YBX1-203ENST00000436427 AP5M1Q9H0R1 490 aa23.81■■□□□ 1.4
YBX1-203ENST00000436427 SEPT4O43236 478 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 LGR5O75473 907 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 SMC2O95347 1197 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 MMP3P08254 477 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 CCND3P30281 292 aaPredicted RBP23.8■■□□□ 1.4
YBX1-203ENST00000436427 GRK4P32298 578 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 DPYDQ12882 1025 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 TRIM50Q86XT4 487 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 SEPT9Q9UHD8 586 aaPredicted RBP23.8■■□□□ 1.4
YBX1-203ENST00000436427 PCDHA5Q9Y5H7 936 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 WDR81Q562E7 1941 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 EMSYQ7Z589 1322 aa23.8■■□□□ 1.4
YBX1-203ENST00000436427 ARHGEF35A5YM69 484 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 TMEM150BA6NC51 233 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 MYMKA6NI61 221 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 INHAP05111 366 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 MYL1P05976 194 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 SASS6Q6UVJ0 657 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 OTUD6AQ7L8S5 288 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 DYMQ7RTS9 669 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 TRIM9Q9C026 710 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 DBR1Q9UK59 544 aaKnown RBP23.79■■□□□ 1.4
YBX1-203ENST00000436427 Q9Y3F1 56 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 DUSP11O75319 330 aaKnown RBP23.79■■□□□ 1.4
YBX1-203ENST00000436427 OATP04181 439 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 LGALS2P05162 132 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 KRT18P05783 430 aaKnown RBP23.79■■□□□ 1.4
YBX1-203ENST00000436427 XRCC6P12956 609 aaKnown RBP eCLIP23.79■■□□□ 1.41e-9■■■■□ 19.9
YBX1-203ENST00000436427 ASIC1P78348 528 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 DGKDQ16760 1214 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 XKR3Q5GH77 459 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 MAP3K21Q5TCX8 1036 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 PLA2G4FQ68DD2 849 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 ANO5Q75V66 913 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 DDX12PQ92771 950 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 C7orf25Q9BPX7 421 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 SH2D3AQ9BRG2 576 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 SMARCAD1Q9H4L7 1026 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 BMP2KQ9NSY1 1161 aaPredicted RBP23.79■■□□□ 1.4
YBX1-203ENST00000436427 PTPN22Q9Y2R2 807 aa23.79■■□□□ 1.4
YBX1-203ENST00000436427 BIN1O00499 593 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 PPFIA4O75335 1185 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 ZNF286BP0CG31 522 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 RARBP10826 455 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 HSPA8P11142 646 aaKnown RBP23.78■■□□□ 1.4
YBX1-203ENST00000436427 CYP11B2P19099 503 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 ATP4AP20648 1035 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 MARK3P27448 753 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 CPT1AP50416 773 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 XKR9Q5GH70 373 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 PLPPR4Q7Z2D5 763 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 ANKEF1Q9NU02 776 aa23.78■■□□□ 1.4
YBX1-203ENST00000436427 LOXHD1Q8IVV2 1947 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 MYH9P35579 1960 aaKnown RBP23.77■■□□□ 1.4
YBX1-203ENST00000436427 A6NJR5 290 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 STBD1O95210 358 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 RARRES1P49788 294 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 RAD51AP2Q09MP3 1159 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 BRDTQ58F21 947 aaPredicted RBP23.77■■□□□ 1.4
YBX1-203ENST00000436427 CEP170P1Q96L14 293 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 RUSC1Q9BVN2 902 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 TUBE1Q9UJT0 475 aa23.77■■□□□ 1.4
YBX1-203ENST00000436427 CENPFP49454 3210 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 HTTP42858 3142 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 NPHP3-ACAD11A0A0J9YXS1 232 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 FSD2A1L4K1 749 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 RPN1P04843 607 aaKnown RBP23.76■■□□□ 1.39
YBX1-203ENST00000436427 NPEPPSP55786 919 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 ISM2Q6H9L7 571 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 RINT1Q6NUQ1 792 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 FAM167AQ96KS9 214 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 NRBP2Q9NSY0 501 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 ERAP1Q9NZ08 941 aa23.76■■□□□ 1.39
YBX1-203ENST00000436427 C6orf222P0C671 652 aaPredicted RBP23.75■■□□□ 1.39
YBX1-203ENST00000436427 HSPA1AP0DMV8 641 aaKnown RBP23.75■■□□□ 1.39
YBX1-203ENST00000436427 HSPA1BP0DMV9 641 aaKnown RBP23.75■■□□□ 1.39
YBX1-203ENST00000436427 CCDC192P0DO97 292 aa23.75■■□□□ 1.39
YBX1-203ENST00000436427 HOXD8P13378 290 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms