RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 HOXD13P35453 343 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 SETQ01105 290 aaPredicted RBP12.04□□□□□ -0.48
LINC01516-201ENST00000436140 C1orf186Q6ZWK4 172 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
LINC01516-201ENST00000436140 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 CEP170P1Q96L14 293 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
LINC01516-201ENST00000436140 LRRC27Q9C0I9 530 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 ZSWIM4Q9H7M6 989 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 PDGFCQ9NRA1 345 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 IMPACTQ9P2X3 320 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC01516-201ENST00000436140 LIMA1Q9UHB6 759 aaKnown RBP12.04□□□□□ -0.48
LINC01516-201ENST00000436140 V9GYY5 206 aaPredicted RBP12.04□□□□□ -0.48
LINC01516-201ENST00000436140 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
LINC01516-201ENST00000436140 CCL15-CCL14A0A0B4J2E2 113 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 GOLGA8IPA6NC78 632 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 GOLGA8JA6NMD2 632 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 CCL15Q16663 113 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 NOL9Q5SY16 702 aaKnown RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 HYIQ5T013 277 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 SYT10Q6XYQ8 523 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 FBXO16Q8IX29 292 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 ACRBPQ8NEB7 543 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 SEPT9Q9UHD8 586 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 NRDCO43847 1150 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 ZNF862O60290 1169 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 CCDC60Q8IWA6 550 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 RIT2Q99578 217 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 ADAMTS5Q9UNA0 930 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 A0A0G2JLL6 359 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 PDHXO00330 501 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 STXBP2Q15833 593 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 RAD9BQ6WBX8 426 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 PRRT2Q7Z6L0 340 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
LINC01516-201ENST00000436140 GINM1Q9NU53 330 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 COL4A3BPQ9Y5P4 624 aa12.03□□□□□ -0.48
LINC01516-201ENST00000436140 K7ENM7 598 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 ACTN1P12814 892 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 RARRES1P49788 294 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 ACTR2P61160 394 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 RBM10P98175 930 aaKnown RBP12.02□□□□□ -0.49
LINC01516-201ENST00000436140 FKBP3Q00688 224 aaKnown RBP12.02□□□□□ -0.49
LINC01516-201ENST00000436140 SPAG1Q07617 926 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 KCTD2Q14681 263 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.49
LINC01516-201ENST00000436140 RPTORQ8N122 1335 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 TMEM143Q96AN5 459 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 JPH1Q9HDC5 661 aaPredicted RBP12.02□□□□□ -0.49
LINC01516-201ENST00000436140 BTBD19C9JJ37 291 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 TPM2P07951 284 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 PLEKP08567 350 aaPredicted RBP12.02□□□□□ -0.49
LINC01516-201ENST00000436140 TPM1P09493 284 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 HUNKP57058 714 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 MIIPQ5JXC2 388 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 ANO5Q75V66 913 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 DAW1Q8N136 415 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 THAP9Q9H5L6 903 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 SUGCTQ9HAC7 445 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 MLXIPQ9HAP2 919 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 GBA2Q9HCG7 927 aaPredicted RBP12.02□□□□□ -0.49
LINC01516-201ENST00000436140 TUFT1Q9NNX1 390 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.49
LINC01516-201ENST00000436140 LGALS16A8MUM7 142 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 CLSTN1O94985 981 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 CYP27A1Q02318 531 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 EHHADHQ08426 723 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 TBX2Q13207 712 aaPredicted RBP12.01□□□□□ -0.49
LINC01516-201ENST00000436140 KNOP1Q1ED39 458 aaKnown RBP12.01□□□□□ -0.49
LINC01516-201ENST00000436140 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 FKBP15Q5T1M5 1219 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.01□□□□□ -0.49
LINC01516-201ENST00000436140 LRRC55Q6ZSA7 311 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 ZC3H15Q8WU90 426 aaKnown RBP12.01□□□□□ -0.49
LINC01516-201ENST00000436140 ZBTB9Q96C00 473 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 PPP1R13BQ96KQ4 1090 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 TBC1D22BQ9NU19 505 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 SLC9A2Q9UBY0 812 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 CPA4Q9UI42 421 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 AGTPBP1Q9UPW5 1226 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 LUC7L2Q9Y383 392 aaKnown RBP12.01□□□□□ -0.49
LINC01516-201ENST00000436140 SBF1O95248 1867 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 LRRC10BA6NIK2 292 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 LRRN2O75325 713 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 AKAP3O75969 853 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 ARIH2O95376 493 aa12.01□□□□□ -0.49
LINC01516-201ENST00000436140 PNMA6AP0CW24 399 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms