RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 CRISPLD2Q9H0B8 497 aa13.78□□□□□ -0.2
LINC00339-204ENST00000434233 TUT1Q9H6E5 874 aaKnown RBP13.78□□□□□ -0.2
LINC00339-204ENST00000434233 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
LINC00339-204ENST00000434233 DDX19AQ9NUU7 478 aaKnown RBP13.78□□□□□ -0.2
LINC00339-204ENST00000434233 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
LINC00339-204ENST00000434233 ZNF215Q9UL58 517 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-204ENST00000434233 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
LINC00339-204ENST00000434233 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
LINC00339-204ENST00000434233 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 HAS3O00219 553 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 ZNF862O60290 1169 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 HBP1O60381 514 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 CABYRO75952 493 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 ZNF202O95125 648 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 ASGR1P07306 291 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 SYKP43405 635 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 NDUFA8P51970 172 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 UGCGQ16739 394 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 POTEBQ6S5H4 581 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 KAT2BQ92831 832 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 FAM167AQ96KS9 214 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 KATNAL1Q9BW62 490 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 NIFKQ9BYG3 293 aaKnown RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 GOLPH3LQ9H4A5 285 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 WRAP73Q9P2S5 460 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
LINC00339-204ENST00000434233 DBR1Q9UK59 544 aaKnown RBP13.77□□□□□ -0.21
LINC00339-204ENST00000434233 A0A087X0B3 334 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 E9PMD0 336 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 EYA4O95677 639 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 F2P00734 622 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 TFRCP02786 760 aaKnown RBP13.76□□□□□ -0.21
LINC00339-204ENST00000434233 OATP04181 439 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PLCG1P19174 1290 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 YWHABP31946 246 aaKnown RBP13.76□□□□□ -0.21
LINC00339-204ENST00000434233 GJA8P48165 433 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PSEN2P49810 448 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PSMC6P62333 389 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 SNW1Q13573 536 aaKnown RBP13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 E2F4Q16254 413 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 FMR1NBQ8N0W7 255 aaPredicted RBP13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PDILTQ8N807 584 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PLIN2Q99541 437 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
LINC00339-204ENST00000434233 KAT6AQ92794 2004 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 KBTBD13C9JR72 458 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 DNM1LO00429 736 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ZBTB39O15060 712 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ZNF286BP0CG31 522 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 LIG1P18858 919 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 STAT6P42226 847 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ACLYP53396 1101 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 PRKCEQ02156 737 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 MFSD10Q14728 455 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 NAALADL2Q58DX5 795 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ZNF484Q5JVG2 852 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ANO5Q75V66 913 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ELOA2Q8IYF1 753 aaPredicted RBP13.75□□□□□ -0.21
LINC00339-204ENST00000434233 SYT2Q8N9I0 419 aaPredicted RBP13.75□□□□□ -0.21
LINC00339-204ENST00000434233 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 PIGOQ8TEQ8 1089 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 RAD54LQ92698 747 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
LINC00339-204ENST00000434233 A0A087WWV3 80 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 NR1I2O75469 434 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 MBD3O95983 291 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-204ENST00000434233 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 PLA2G4BP0C869 781 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 MARK3P27448 753 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 RARRES1P49788 294 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 KANK3Q6NY19 840 aa13.74□□□□□ -0.21
LINC00339-204ENST00000434233 CXCL17Q6UXB2 119 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms