RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PPP2R3AQ06190 1150 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 GIT2Q14161 759 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 CCDC40Q4G0X9 1142 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 RGMBQ6NW40 437 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 ZC3H3Q8IXZ2 948 aaKnown RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 BRI3BPQ8WY22 251 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 EIF3CQ99613 913 aaKnown RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 CARD6Q9BX69 1037 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 KCTD10Q9H3F6 313 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 RIPK3Q9Y572 518 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 PSMD10O75832 226 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 GTF2A2P52657 109 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 TMEM132BQ14DG7 1078 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 HSD17B14Q9BPX1 270 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 TRAF3IP3Q9Y228 551 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 PDHXO00330 501 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 CETN3O15182 167 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 CETPP11597 493 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 GAP43P17677 238 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 HTRA3P83110 453 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 PTPN18Q99952 460 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 NHEJ1Q9H9Q4 299 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 PDXKO00764 312 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 GAS7O60861 476 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 HSD17B4P51659 736 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 PSMC6P62333 389 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 GHRHRQ02643 423 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 CYP4F22Q6NT55 531 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
CTCFL-209ENST00000433949 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 CCDC42Q96M95 316 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 UIMC1Q96RL1 719 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 ZHX3Q9H4I2 956 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 MMRN2Q9H8L6 949 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 TLL2Q9Y6L7 1015 aa13.16□□□□□ -0.3
CTCFL-209ENST00000433949 MEIS1O00470 390 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 NFIBO00712 420 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 FDX1P10109 184 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 BCRP11274 1271 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 KLK7P49862 253 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 HERVK_113P62684 666 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 ADAM9Q13443 819 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 SPA17Q15506 151 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 KNOP1Q1ED39 458 aaKnown RBP13.15□□□□□ -0.3
CTCFL-209ENST00000433949 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 MUM1L1Q5H9M0 696 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 TRIM59Q8IWR1 403 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 SLC35F6Q8N357 371 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 NEK9Q8TD19 979 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-209ENST00000433949 RIT2Q99578 217 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 BTBD7Q9P203 1132 aa13.15□□□□□ -0.3
CTCFL-209ENST00000433949 REXO2Q9Y3B8 237 aaKnown RBP13.15□□□□□ -0.3
CTCFL-209ENST00000433949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTCFL-209ENST00000433949 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.31
CTCFL-209ENST00000433949 CALUO43852 315 aaPredicted RBP13.15□□□□□ -0.31
CTCFL-209ENST00000433949 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.31
CTCFL-209ENST00000433949 CYP4A11Q02928 519 aa13.15□□□□□ -0.31
CTCFL-209ENST00000433949 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.31
CTCFL-209ENST00000433949 EPM2AIP1Q7L775 607 aaPredicted RBP13.15□□□□□ -0.31
CTCFL-209ENST00000433949 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms