RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 FAM153AQ9UHL3 310 aa12.95□□□□□ -0.34
CD44-209ENST00000433892 SFI1A8K8P3 1242 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 TBX3O15119 743 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 MSH4O15457 936 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 HSF2BPO75031 334 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 NDUFB10O96000 172 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 NPR1P16066 1061 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 SREBF1P36956 1147 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 CASP4P49662 377 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 DNAJC21Q5F1R6 531 aaKnown RBP12.94□□□□□ -0.34
CD44-209ENST00000433892 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
CD44-209ENST00000433892 ARL8AQ96BM9 186 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 INPP4AQ96PE3 977 aaPredicted RBP12.94□□□□□ -0.34
CD44-209ENST00000433892 RUFY1Q96T51 708 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 GDF3Q9NR23 364 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
CD44-209ENST00000433892 GOLGA8KD6RF30 607 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ANKRD65E5RJM6 399 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 PDXKO00764 312 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 KCNK3O14649 394 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 CLIC2O15247 247 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 CALUO43852 315 aaPredicted RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 OPA1O60313 960 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 SHOX2O60902 331 aaPredicted RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 TRIM37O94972 964 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 GCNT3O95395 438 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 NOP2P46087 812 aaKnown RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 TRADDQ15628 312 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ALS2CLQ60I27 953 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 IKZF4Q9H2S9 585 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 PLCB1Q9NQ66 1216 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 TMEM51Q9NW97 253 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 EML1O00423 815 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 OPLAHO14841 1288 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 KRT14P02533 472 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 NR3C1P04150 777 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 POLD1P28340 1107 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 IRAK1P51617 712 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 GUCY2FP51841 1108 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 JAG1P78504 1218 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 PPFIA1Q13136 1202 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ABCB5Q2M3G0 1257 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 TTMPQ5BVD1 217 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 SYDE2Q5VT97 1194 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 TATDN1Q6P1N9 297 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ZIM3Q96PE6 472 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 RABEP2Q9H5N1 569 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 NAGPAQ9UK23 515 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 AJAP1Q9UKB5 411 aaPredicted RBP12.93□□□□□ -0.34
CD44-209ENST00000433892 VAV3Q9UKW4 847 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 ASTN1O14525 1302 aa12.93□□□□□ -0.34
CD44-209ENST00000433892 TBCAO75347 108 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 ZNF76P36508 570 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 EPHA7Q15375 998 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 RPS6KA1Q15418 735 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 KLHL7Q8IXQ5 586 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 SPICE1Q8N0Z3 855 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 USP38Q8NB14 1042 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 CASKIN2Q8WXE0 1202 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 TAF4BQ92750 862 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 EIF2AK1Q9BQI3 630 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 CAPS2Q9BXY5 557 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 RASSF4Q9H2L5 321 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 AFF2P51816 1311 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 ANKRD31Q8N7Z5 1873 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 RAD51CO43502 376 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 PAK2Q13177 524 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 NNTQ13423 1086 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 KCTD16Q68DU8 428 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 SLC35C1Q96A29 364 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 GCNT4Q9P109 453 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 BZW2Q9Y6E2 419 aaKnown RBP12.92□□□□□ -0.34
CD44-209ENST00000433892 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
CD44-209ENST00000433892 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
CD44-209ENST00000433892 GH2P01242 217 aa12.91□□□□□ -0.34
CD44-209ENST00000433892 BMP3P12645 472 aa12.91□□□□□ -0.34
CD44-209ENST00000433892 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms