RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TTLL4Q14679 1199 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 CCDC62Q6P9F0 684 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 C11orf57Q6ZUT1 292 aaPredicted RBP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 CYFIP1Q7L576 1253 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 C4orf19Q8IY42 314 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 MLKLQ8NB16 471 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 HTATIP2Q9BUP3 242 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 GTPBP4Q9BZE4 634 aaKnown RBP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 BMP2KQ9NSY1 1161 aaPredicted RBP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 DACH1Q9UI36 760 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 PVALEFA0A1B0GWK0 134 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 RBM47A0AV96 593 aaKnown RBP20.31■□□□□ 0.84
HMGN1-206ENST00000431390 ATG7O95352 703 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 BMP6P22004 513 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 RGS2P41220 211 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 ASIC1P78348 528 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 ISM2Q6H9L7 571 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 MIS18BP1Q6P0N0 1132 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 ABHD15Q6UXT9 468 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 DDX12PQ92771 950 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 BPIFA3Q9BQP9 254 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 KATNBL1Q9H079 304 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 UNC93B1Q9H1C4 597 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 BCAS3Q9H6U6 928 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 WRAP73Q9P2S5 460 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-206ENST00000431390 ALPK3Q96L96 1907 aa20.31■□□□□ 0.84
HMGN1-206ENST00000431390 RHOBTB3O94955 611 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 ARIH2O95376 493 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-206ENST00000431390 SSBP05455 408 aaKnown RBP eCLIP20.3■□□□□ 0.84
HMGN1-206ENST00000431390 XRCC6P12956 609 aaKnown RBP eCLIP20.3■□□□□ 0.84
HMGN1-206ENST00000431390 CYP11B2P19099 503 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 LY6KQ17RY6 165 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 CT47A1Q5JQC4 288 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-206ENST00000431390 TAPT1Q6NXT6 567 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 UNC13DQ70J99 1090 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 GPBP1Q86WP2 473 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 RNF214Q8ND24 703 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 SLAIN1Q8ND83 568 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 U2AF1L4Q8WU68 220 aaKnown RBP20.3■□□□□ 0.84
HMGN1-206ENST00000431390 BHMT2Q9H2M3 363 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 ABHD16BQ9H3Z7 469 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 GJD2Q9UKL4 321 aa20.3■□□□□ 0.84
HMGN1-206ENST00000431390 MYH9P35579 1960 aaKnown RBP20.3■□□□□ 0.84
HMGN1-206ENST00000431390 GGPS1O95749 300 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 SUPT20HL2P0C7V6 817 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 KMT5BQ4FZB7 885 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 CELF3Q5SZQ8 465 aaKnown RBP20.29■□□□□ 0.84
HMGN1-206ENST00000431390 ZNF658Q5TYW1 1059 aaPredicted RBP20.29■□□□□ 0.84
HMGN1-206ENST00000431390 PIGOQ8TEQ8 1089 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 ATP6V0A1Q93050 837 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 DNAJC19Q96DA6 116 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 APBA2Q99767 749 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 CBX8Q9HC52 389 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 DBR1Q9UK59 544 aaKnown RBP20.29■□□□□ 0.84
HMGN1-206ENST00000431390 TXNP10599 105 aaKnown RBP20.29■□□□□ 0.84
HMGN1-206ENST00000431390 UVSSAQ2YD98 709 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 OLFML2BQ68BL8 750 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 DYMQ7RTS9 669 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 MLXIPQ9HAP2 919 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 EXOC1Q9NV70 894 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 KCND2Q9NZV8 630 aa20.29■□□□□ 0.84
HMGN1-206ENST00000431390 UGCGQ16739 394 aa20.28■□□□□ 0.84
HMGN1-206ENST00000431390 PRO3102Q9H379 93 aa20.28■□□□□ 0.84
HMGN1-206ENST00000431390 PDGFCQ9NRA1 345 aa20.28■□□□□ 0.84
HMGN1-206ENST00000431390 GABBR1Q9UBS5 961 aa20.28■□□□□ 0.84
HMGN1-206ENST00000431390 IGSF9BQ9UPX0 1349 aa20.28■□□□□ 0.84
HMGN1-206ENST00000431390 IGKV6D-21A0A0A0MT36 114 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 ADCY3O60266 1144 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 ELNP15502 786 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 YWHABP31946 246 aaKnown RBP20.27■□□□□ 0.84
HMGN1-206ENST00000431390 FLT3LGP49771 235 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 SP4Q02446 784 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 ACVR2BQ13705 512 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 IQCB1Q15051 598 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 ARSHQ5FYA8 562 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 DHX37Q8IY37 1157 aaKnown RBP20.27■□□□□ 0.84
HMGN1-206ENST00000431390 SEPT1Q8WYJ6 367 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 ANKEF1Q9NU02 776 aa20.27■□□□□ 0.84
HMGN1-206ENST00000431390 GSTTP1A0A1W2PQM5 241 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 ARHGEF35A5YM69 484 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 SORBS3O60504 671 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 SGPL1O95470 568 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 KRT18P05783 430 aaKnown RBP20.26■□□□□ 0.83
HMGN1-206ENST00000431390 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
HMGN1-206ENST00000431390 CYP2B6P20813 491 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 RINT1Q6NUQ1 792 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 SWSAP1Q6NVH7 229 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 CCDC60Q8IWA6 550 aaPredicted RBP20.26■□□□□ 0.83
HMGN1-206ENST00000431390 CCDC65Q8IXS2 484 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 TELO2Q9Y4R8 837 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 MAFBQ9Y5Q3 323 aaPredicted RBP20.26■□□□□ 0.83
HMGN1-206ENST00000431390 NR2E3Q9Y5X4 410 aa20.26■□□□□ 0.83
HMGN1-206ENST00000431390 RANBP2P49792 3224 aaKnown RBP20.26■□□□□ 0.83
HMGN1-206ENST00000431390 FRMD3A2A2Y4 597 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 ZBTB39O15060 712 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 IGHA2P01877 340 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 INHAP05111 366 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms