RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KCNH2Q12809 1159 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 TNFAIP1Q13829 316 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
HOXC4-202ENST00000430889 SAMD3Q8N6K7 520 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 IL31RAQ8NI17 732 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 NEK9Q8TD19 979 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 ZNF577Q9BSK1 485 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 STRA6Q9BX79 667 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 TEKT3Q9BXF9 490 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 PLCB1Q9NQ66 1216 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 KCND2Q9NZV8 630 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 SEL1LQ9UBV2 794 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
HOXC4-202ENST00000430889 SCAF8Q9UPN6 1271 aaKnown RBP15.37■□□□□ 0.05
HOXC4-202ENST00000430889 UBIAD1Q9Y5Z9 338 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 UBE4BO95155 1302 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 IPO5O00410 1097 aaKnown RBP15.36■□□□□ 0.05
HOXC4-202ENST00000430889 ZBTB39O15060 712 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 DHX15O43143 795 aaKnown RBP15.36■□□□□ 0.05
HOXC4-202ENST00000430889 AKAP3O75969 853 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 NR3C1P04150 777 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 KCNA1Q09470 495 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 SPA17Q15506 151 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 TMCO3Q6UWJ1 677 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 TPH2Q8IWU9 490 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 KRT222Q8N1A0 295 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 JDP2Q8WYK2 163 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 HOOK2Q96ED9 719 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 IFIH1Q9BYX4 1025 aaKnown RBP15.36■□□□□ 0.05
HOXC4-202ENST00000430889 AIPL1Q9NZN9 384 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 HDAC6Q9UBN7 1215 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 LOC285556D6RIA3 1793 aa15.36■□□□□ 0.05
HOXC4-202ENST00000430889 CCDC151A5D8V7 595 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CHMP2AO43633 222 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 TBC1D8O95759 1140 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SERPING1P05155 500 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 GUCY2CP25092 1073 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 APBA1Q02410 837 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 MAPK7Q13164 816 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 GLIPR1L2Q4G1C9 344 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 UBXN6Q9BZV1 441 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ZSWIM4Q9H7M6 989 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 MAP3K20Q9NYL2 800 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ARMCX3Q9UH62 379 aaPredicted RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CTAGE15A4D2H0 777 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ENC1O14682 589 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 PPP1R37O75864 691 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 GCNT3O95395 438 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CTAGE8P0CG41 777 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 POLR2FP61218 127 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 MRPS9P82933 396 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 BRD3Q15059 726 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 MUM1L1Q5H9M0 696 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SFMBT2Q5VUG0 894 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 PCNX4Q63HM2 1172 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CACNA2D4Q7Z3S7 1137 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CTAGE6Q86UF2 777 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CTAGE4Q8IX94 777 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SYTL5Q8TDW5 730 aaPredicted RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 HNRNPLLQ8WVV9 542 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SECISBP2LQ93073 1101 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SLC35C1Q96A29 364 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 PNKPQ96T60 521 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 LXNQ9BS40 222 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CRACR2AQ9BSW2 395 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 METTL14Q9HCE5 456 aaKnown RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 NLRC4Q9NPP4 1024 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 DMAC2Q9NW81 257 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ZNF112Q9UJU3 913 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 PPP1R9AQ9ULJ8 1098 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 SAR1BQ9Y6B6 198 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 CAPN6Q9Y6Q1 641 aa15.35■□□□□ 0.05
HOXC4-202ENST00000430889 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
HOXC4-202ENST00000430889 FZD9O00144 591 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 SASH3O75995 380 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 FAM13AO94988 1023 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 ZBTB7AO95365 584 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 AFPP02771 609 aaKnown RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 PLA2G4AP47712 749 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 CASP4P49662 377 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 ITGB3BPQ13352 177 aaPredicted RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 DGKZQ13574 1117 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 TKFCQ3LXA3 575 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 ZNF720Q7Z2F6 126 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 MCF2L2Q86YR7 1114 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 DAW1Q8N136 415 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 NOA1Q8NC60 698 aaKnown RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 PARVGQ9HBI0 331 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 AGO4Q9HCK5 861 aaKnown RBP15.34■□□□□ 0.05
HOXC4-202ENST00000430889 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 SIX2Q9NPC8 291 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms