RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 HLA-CQ95604 372 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 AZI2Q9H6S1 392 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 PCDHA2Q9Y5H9 948 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 NCOR1O75376 2440 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 WDR81Q562E7 1941 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 TTC3P53804 2025 aa18.52■□□□□ 0.56
PTPRA-206ENST00000430705 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
PTPRA-206ENST00000430705 ENPP3O14638 875 aa18.52■□□□□ 0.56
PTPRA-206ENST00000430705 PDIA3P30101 505 aaKnown RBP18.52■□□□□ 0.56
PTPRA-206ENST00000430705 RSPH3Q86UC2 560 aa18.52■□□□□ 0.56
PTPRA-206ENST00000430705 RTN4RL1Q86UN2 441 aaPredicted RBP18.52■□□□□ 0.56
PTPRA-206ENST00000430705 REXO1Q8N1G1 1221 aaKnown RBP18.52■□□□□ 0.56
PTPRA-206ENST00000430705 TRPV2Q9Y5S1 764 aa18.52■□□□□ 0.56
PTPRA-206ENST00000430705 ADGRA3Q8IWK6 1321 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 POTEB3A0JP26 581 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 H3BNC9 293 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 IPO5O00410 1097 aaKnown RBP18.51■□□□□ 0.55
PTPRA-206ENST00000430705 IFNAR1P17181 557 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 ZNF76P36508 570 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 POTEBQ6S5H4 581 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 MTHFD1LQ6UB35 978 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 TMEM192Q8IY95 271 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 ZNF689Q96CS4 500 aaPredicted RBP18.51■□□□□ 0.55
PTPRA-206ENST00000430705 SAMD11Q96NU1 681 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 RNF26Q9BY78 433 aaPredicted RBP18.51■□□□□ 0.55
PTPRA-206ENST00000430705 VPS54Q9P1Q0 977 aa18.51■□□□□ 0.55
PTPRA-206ENST00000430705 SMIM35A0A1B0GVV1 85 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 REC8O95072 547 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 CCT2P78371 535 aaKnown RBP18.5■□□□□ 0.55
PTPRA-206ENST00000430705 AAK1Q2M2I8 961 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 ATP8B4Q8TF62 1192 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 MRPL38Q96DV4 380 aaKnown RBP18.5■□□□□ 0.55
PTPRA-206ENST00000430705 SLC26A6Q9BXS9 759 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 TMX1Q9H3N1 280 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 UBE2ZQ9H832 354 aaPredicted RBP18.5■□□□□ 0.55
PTPRA-206ENST00000430705 ZSWIM6Q9HCJ5 1215 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 C6orf50Q9HD87 102 aa18.5■□□□□ 0.55
PTPRA-206ENST00000430705 KDM3AQ9Y4C1 1321 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.49■□□□□ 0.55
PTPRA-206ENST00000430705 CIITAP33076 1130 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 SLC26A2P50443 739 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 GPM6BQ13491 265 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 RUFY3Q7L099 469 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 TMEM40Q8WWA1 233 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 IL17RAQ96F46 866 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 ZNF577Q9BSK1 485 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
PTPRA-206ENST00000430705 CDHR5Q9HBB8 845 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 ZNF302Q9NR11 478 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 SQORQ9Y6N5 450 aa18.49■□□□□ 0.55
PTPRA-206ENST00000430705 COL1A2P08123 1366 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 C5orf67F2Z3F1 127 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 BACH1O14867 736 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 DGKIO75912 1065 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 KLRC1P26715 233 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 SETQ01105 290 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-206ENST00000430705 NPY5RQ15761 445 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 TMEM266Q2M3C6 531 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 IER5Q5VY09 327 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 SWSAP1Q6NVH7 229 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 KIAA0319LQ8IZA0 1049 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 CCDC12Q8WUD4 166 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-206ENST00000430705 CLP1Q92989 425 aaKnown RBP18.48■□□□□ 0.55
PTPRA-206ENST00000430705 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
PTPRA-206ENST00000430705 MAFBQ9Y5Q3 323 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-206ENST00000430705 C5orf42Q9H799 3197 aa18.48■□□□□ 0.55
PTPRA-206ENST00000430705 HBP1O60381 514 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 MGEA5O60502 916 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 C22orf31O95567 290 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 RPLP2P05387 115 aaKnown RBP18.47■□□□□ 0.55
PTPRA-206ENST00000430705 PSMA5P28066 241 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 CTNNB1P35222 781 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 COL19A1Q14993 1142 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 PRR16Q569H4 304 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 FAM160B1Q5W0V3 765 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 ZNF746Q6NUN9 644 aaPredicted RBP18.47■□□□□ 0.55
PTPRA-206ENST00000430705 MIS18BP1Q6P0N0 1132 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 FIBCD1Q8N539 461 aa18.47■□□□□ 0.55
PTPRA-206ENST00000430705 KHSRPQ92945 711 aaKnown RBP eCLIP18.47■□□□□ 0.551e-7■■■■□ 24.1
PTPRA-206ENST00000430705 EVPLQ92817 2033 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 GRM6O15303 877 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 MSH4O15457 936 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
PTPRA-206ENST00000430705 GNA11P29992 359 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 GATMP50440 423 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 KRT76Q01546 638 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 PAK2Q13177 524 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 TCEAL5Q5H9L2 206 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 MCTP2Q6DN12 878 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 CCDC148Q8NFR7 591 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.46■□□□□ 0.55
PTPRA-206ENST00000430705 GJA10Q969M2 543 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 AIFM3Q96NN9 605 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
PTPRA-206ENST00000430705 ERVK-5Q9HDB9 667 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 CD320Q9NPF0 282 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms