RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 FGD1P98174 961 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 RUFY3Q7L099 469 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 RTN4RL1Q86UN2 441 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-202ENST00000430200 CRIPAKQ8N1N5 446 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-202ENST00000430200 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 INSL6Q9Y581 213 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 IGSF9BQ9UPX0 1349 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 IPO5O00410 1097 aaKnown RBP13.41□□□□□ -0.26
HDAC4-202ENST00000430200 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-202ENST00000430200 REC8O95072 547 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 GATMP50440 423 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 STAT5BP51692 787 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
HDAC4-202ENST00000430200 UGCGQ16739 394 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
HDAC4-202ENST00000430200 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 POTEB3A0JP26 581 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 M0R2N6 131 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 MGEA5O60502 916 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 C22orf31O95567 290 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 POTEBQ6S5H4 581 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 TEX2Q8IWB9 1127 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 APBB2Q92870 758 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC4-202ENST00000430200 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 UHRF1Q96T88 793 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-202ENST00000430200 YME1L1Q96TA2 773 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 HCSTQ9UBK5 93 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 PCDHA2Q9Y5H9 948 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
HDAC4-202ENST00000430200 WDFY4Q6ZS81 3184 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 CCDC196A0A1B0GTZ2 297 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF862O60290 1169 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 TDP2O95551 362 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 CIITAP33076 1130 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF76P36508 570 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 STK3Q13188 491 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 PRR16Q569H4 304 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF689Q96CS4 500 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF577Q9BSK1 485 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 C6orf50Q9HD87 102 aa13.39□□□□□ -0.27
HDAC4-202ENST00000430200 TMEM150BA6NC51 233 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 ENPP3O14638 875 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 BACH1O14867 736 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 MSH4O15457 936 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 LARGE1O95461 756 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 KLRC1P26715 233 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 SWSAP1Q6NVH7 229 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
HDAC4-202ENST00000430200 TMEM192Q8IY95 271 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 KIAA0319LQ8IZA0 1049 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 LINC01465Q8N7H1 131 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 GLT8D2Q9H1C3 349 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 CD320Q9NPF0 282 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 PADI3Q9ULW8 664 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 MAFBQ9Y5Q3 323 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-202ENST00000430200 KDM3AQ9Y4C1 1321 aa13.38□□□□□ -0.27
HDAC4-202ENST00000430200 COL1A2P08123 1366 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 H3BNC9 293 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 GRM6O15303 877 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 DGKIO75912 1065 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 CSPG5O95196 566 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 PSMA5P28066 241 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 CTNNB1P35222 781 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 CLCN3P51790 818 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 SCRN1Q12765 414 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF746Q6NUN9 644 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 MRPL38Q96DV4 380 aaKnown RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 CELF4Q9BZC1 486 aaKnown RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 TM6SF1Q9BZW5 370 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 UNC45AQ9H3U1 944 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 UBE2ZQ9H832 354 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 RAPGEFL1Q9UHV5 662 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 NOC2LQ9Y3T9 749 aaKnown RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
HDAC4-202ENST00000430200 MRPL42Q9Y6G3 142 aaKnown RBP13.37□□□□□ -0.27
HDAC4-202ENST00000430200 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 CHMP2AO43633 222 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms