RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 MYCBPAPQ8TBZ2 947 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 ACTRT1Q8TDG2 376 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 SPAG5Q96R06 1193 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 CCT8L2Q96SF2 557 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
LINC00839-202ENST00000429940 QSER1Q2KHR3 1735 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 H0YHG0 523 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
LINC00839-202ENST00000429940 MYZAPP0CAP1 466 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 CYP11B2P19099 503 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 NR2F2P24468 414 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 ECHS1P30084 290 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 PDE6BP35913 854 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 USP8P40818 1118 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
LINC00839-202ENST00000429940 PTPROQ16827 1216 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 PRPF38AQ8NAV1 312 aaKnown RBP16.43■□□□□ 0.22
LINC00839-202ENST00000429940 BZW2Q9Y6E2 419 aaKnown RBP16.43■□□□□ 0.22
LINC00839-202ENST00000429940 KIF13BQ9NQT8 1826 aa16.43■□□□□ 0.22
LINC00839-202ENST00000429940 MYH7BA7E2Y1 1941 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 E7EVH7 732 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 FSBPO95073 299 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 AKR1B1P15121 316 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 SLC9A1P19634 815 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 HDLBPQ00341 1268 aaKnown RBP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 C15orf52Q6ZUT6 534 aaKnown RBP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 ILDR2Q71H61 639 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 YTHDF3Q7Z739 585 aaKnown RBP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 ARFGAP2Q8N6H7 521 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 CEP89Q96ST8 783 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 AP1M1Q9BXS5 423 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 YY1AP1Q9H869 796 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 PGRMC1O00264 195 aaKnown RBP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 FAM107AO95990 144 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 UCHL3P15374 230 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 FNTAP49354 379 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 ZNF543Q08ER8 600 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 DPP8Q6V1X1 898 aaPredicted RBP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 DDX42Q86XP3 938 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 LRRC57Q8N9N7 239 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 OR2W6PQ8NHA6 318 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 LRRC45Q96CN5 670 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 CALR3Q96L12 384 aaKnown RBP16.42■□□□□ 0.22
LINC00839-202ENST00000429940 NAGPAQ9UK23 515 aa16.42■□□□□ 0.22
LINC00839-202ENST00000429940 MYO1FO00160 1098 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 CTNNA1P35221 906 aaKnown RBP16.41■□□□□ 0.22
LINC00839-202ENST00000429940 MFSD14BQ5SR56 506 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 SWT1Q5T5J6 900 aaKnown RBP16.41■□□□□ 0.22
LINC00839-202ENST00000429940 RNF187Q5TA31 235 aaPredicted RBP16.41■□□□□ 0.22
LINC00839-202ENST00000429940 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 DNAAF5Q86Y56 855 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
LINC00839-202ENST00000429940 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
LINC00839-202ENST00000429940 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 TMCO5BA8MYB1 307 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 H0YGN5 161 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 SART1O43290 800 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 UFL1O94874 794 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 AFPP02771 609 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 MNAT1P51948 309 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 PICALMQ13492 652 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 UAP1Q16222 522 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 ARSHQ5FYA8 562 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 DPY19L2P1Q6NXN4 242 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 ALKBH5Q6P6C2 394 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 NAP1L4Q99733 375 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 PPANQ9NQ55 473 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 NFS1Q9Y697 457 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 FRMD3A2A2Y4 597 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 KRIT1O00522 736 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 PPEF1O14829 653 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 BBOX1O75936 387 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 TTLL1O95922 423 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 NPR1P16066 1061 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 SLC16A2P36021 539 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 CASP5P51878 434 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 ZNF844Q08AG5 666 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 FRMD5Q7Z6J6 570 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 TPCN2Q8NHX9 752 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 DDX47Q9H0S4 455 aaKnown RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 NEUROG2Q9H2A3 272 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-202ENST00000429940 POLLQ9UGP5 575 aa16.4■□□□□ 0.22
LINC00839-202ENST00000429940 GAKO14976 1311 aa16.39■□□□□ 0.22
LINC00839-202ENST00000429940 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms