RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 ST18O60284 1047 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 MYOGP15173 224 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-210ENST00000428861 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
ATG4B-210ENST00000428861 TMCO2Q7Z6W1 182 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-210ENST00000428861 DEFB123Q8N688 67 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 TEKT3Q9BXF9 490 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-210ENST00000428861 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
ATG4B-210ENST00000428861 TMEM150BA6NC51 233 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 HBP1O60381 514 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 STBD1O95210 358 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 PSAPP07602 524 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 DNAJB2P25686 324 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 SLC26A2P50443 739 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 DEFB103AP81534 67 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 FAM160B1Q5W0V3 765 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 TAF2Q6P1X5 1199 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 CNKSR3Q6P9H4 555 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 MTHFD1LQ6UB35 978 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 RPAINQ86UA6 219 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 DBF4BQ8NFT6 615 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 SEMA6BQ9H3T3 888 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 CHD9Q3L8U1 2897 aa12.13□□□□□ -0.47
ATG4B-210ENST00000428861 KAT6AQ92794 2004 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 CAND2O75155 1236 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 KLRC1P26715 233 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
ATG4B-210ENST00000428861 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
ATG4B-210ENST00000428861 TRIM29Q14134 588 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 PLEKHG4Q58EX7 1191 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATG4B-210ENST00000428861 MIER3Q7Z3K6 550 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 WRAP73Q9P2S5 460 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-210ENST00000428861 PCDHA2Q9Y5H9 948 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 CDY2AQ9Y6F7 541 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 COL6A3P12111 3177 aa12.12□□□□□ -0.47
ATG4B-210ENST00000428861 SIP14410 1827 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 BAIAP3O94812 1187 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 PARNO95453 639 aaKnown RBP12.11□□□□□ -0.47
ATG4B-210ENST00000428861 C22orf31O95567 290 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 OATP04181 439 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 GHRP10912 638 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 ACTN1P12814 892 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
ATG4B-210ENST00000428861 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
ATG4B-210ENST00000428861 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 SFNP31947 248 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 JAK3P52333 1124 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 PRKCEQ02156 737 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 SPIRE1Q08AE8 756 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 PPP2R5CQ13362 524 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 LPIN1Q14693 890 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 ZNF697Q5TEC3 545 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 KIAA0319LQ8IZA0 1049 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-210ENST00000428861 TIFAQ96CG3 184 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 CEP89Q96ST8 783 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 AGO3Q9H9G7 860 aaKnown RBP12.11□□□□□ -0.47
ATG4B-210ENST00000428861 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
ATG4B-210ENST00000428861 CHD7Q9P2D1 2997 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 COL1A2P08123 1366 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 SMIM35A0A1B0GVV1 85 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-210ENST00000428861 TBX3O15119 743 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 GJB2P29033 226 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
ATG4B-210ENST00000428861 NBR1Q14596 966 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 GRIN2CQ14957 1233 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 SPRED2Q7Z698 418 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 HERC6Q8IVU3 1022 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 RDM1Q8NG50 284 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 MTMR9Q96QG7 549 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
ATG4B-210ENST00000428861 FOXP1Q9H334 677 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-210ENST00000428861 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
ATG4B-210ENST00000428861 WDR81Q562E7 1941 aa12.09□□□□□ -0.47
ATG4B-210ENST00000428861 GBF1Q92538 1859 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms