RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 KLRG2A4D1S0 409 aaPredicted RBP9.66□□□□□ -0.86
CDH13-202ENST00000428848 H0YGN5 161 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 NDUFAB1O14561 156 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 PLSCR1O15162 318 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 PPP1R37O75864 691 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 NR1D1P20393 614 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 ALDH1B1P30837 517 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 NAP1L1P55209 391 aaKnown RBP9.66□□□□□ -0.86
CDH13-202ENST00000428848 RHBDL3P58872 404 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 ITGB3BPQ13352 177 aaPredicted RBP9.66□□□□□ -0.86
CDH13-202ENST00000428848 PTGISQ16647 500 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 CCDC40Q4G0X9 1142 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 C10orf76Q5T2E6 689 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 NAA35Q5VZE5 725 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 LRIG3Q6UXM1 1119 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 IFT81Q8WYA0 676 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 COA1Q9GZY4 146 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 VCPKMTQ9H867 229 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 TMBIM4Q9HC24 238 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 PLCB1Q9NQ66 1216 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 ODF2LQ9ULJ1 636 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 NENFQ9UMX5 172 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 NFS1Q9Y697 457 aa9.66□□□□□ -0.86
CDH13-202ENST00000428848 IGKV6D-41A0A0C4DH26 115 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 MYO1FO00160 1098 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 SLC26A4O43511 780 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 RASSF9O75901 435 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 MDH1P40925 334 aaKnown RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 USP11P51784 963 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 ERVK-9P63128 1117 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 GUCY1A3Q02108 690 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 KIAA0753Q2KHM9 967 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 ASPRV1Q53RT3 343 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 MFSD14BQ5SR56 506 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 IRF2BP2Q7Z5L9 587 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 SLC51AQ86UW1 340 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 AMIGO3Q86WK7 504 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 LRRC57Q8N9N7 239 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 ACTRT1Q8TDG2 376 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 SCFD1Q8WVM8 642 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 TAF1DQ9H5J8 278 aaPredicted RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 KLC4Q9NSK0 619 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 PACSIN2Q9UNF0 486 aaPredicted RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH13-202ENST00000428848 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 KIF4AO95239 1232 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 PDE6BP35913 854 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 GUCY2FP51841 1108 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 TNNC1P63316 161 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 ACTN3Q08043 901 aaPredicted RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 KLHL30Q0D2K2 578 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 EDRF1Q3B7T1 1238 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 C6orf89Q6UWU4 347 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 TBC1D16Q8TBP0 767 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 ZNF473Q8WTR7 871 aaKnown RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 PBKQ96KB5 322 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 MTMR4Q9NYA4 1195 aa9.65□□□□□ -0.86
CDH13-202ENST00000428848 GREB1LQ9C091 1923 aaPredicted RBP9.65□□□□□ -0.86
CDH13-202ENST00000428848 GAKO14976 1311 aa9.65□□□□□ -0.87
CDH13-202ENST00000428848 FRMPD2Q68DX3 1309 aaPredicted RBP9.65□□□□□ -0.87
CDH13-202ENST00000428848 KDM3AQ9Y4C1 1321 aa9.65□□□□□ -0.87
CDH13-202ENST00000428848 A0A1B0GUA9 196 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 POLRMTO00411 1230 aaKnown RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 PPP1R11O60927 126 aaPredicted RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 NPR1P16066 1061 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 GABPAQ06546 454 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 RAPGEF1Q13905 1077 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 UAP1Q16222 522 aaPredicted RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 ASIC2Q16515 512 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CEP85LQ5SZL2 805 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 PPP4R3CPQ6ZMV5 832 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CCDC65Q8IXS2 484 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 FAM133AQ8N9E0 248 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 MYCBPAPQ8TBZ2 947 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 NT5C3AQ9H0P0 336 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CD248Q9HCU0 757 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 DDX25Q9UHL0 483 aaKnown RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 PLAAQ9Y263 795 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 PNMA6FA0A0J9YX94 578 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 E9PMD0 336 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 G3V3G9 751 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 PLA2G4BP0C869 781 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CYP11B2P19099 503 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 PRKCIP41743 596 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CDR1P51861 262 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 PTK2Q05397 1052 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 KCNH2Q12809 1159 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CUL1Q13616 776 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 RPS6KA1Q15418 735 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 DCAF8Q5TAQ9 597 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 ZNF571Q7Z3V5 609 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms