RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 STEAP3Q658P3 488 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 DEFB132Q7Z7B7 95 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 C1orf159Q96HA4 380 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 LCORQ96JN0 433 aaPredicted RBP7.79□□□□□ -1.16
C9orf3-205ENST00000427193 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.79□□□□□ -1.16
C9orf3-205ENST00000427193 TRPC5Q9UL62 973 aaPredicted RBP7.79□□□□□ -1.16
C9orf3-205ENST00000427193 INVSQ9Y283 1065 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 PCDHB4Q9Y5E5 795 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 NPFFR2Q9Y5X5 522 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 PNPLA6Q8IY17 1366 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 BLMP54132 1417 aaPredicted RBP7.78□□□□□ -1.16
C9orf3-205ENST00000427193 TCRBV5S2A0A599 114 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 AGRPO00253 132 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 DGKIO75912 1065 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 CAPNS1P04632 268 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 LCP1P13796 627 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 ZNF28P17035 718 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 ATF3P18847 181 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 SLC35F1Q5T1Q4 408 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 MICAL1Q8TDZ2 1067 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
C9orf3-205ENST00000427193 EPB41L1Q9H4G0 881 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 CLDND1Q9NY35 253 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 BCL9LQ86UU0 1499 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 CHD2O14647 1828 aaKnown RBP7.78□□□□□ -1.16
C9orf3-205ENST00000427193 PIK3C2BO00750 1634 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 ATRNO75882 1429 aa7.78□□□□□ -1.16
C9orf3-205ENST00000427193 CYP7B1O75881 506 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 MAP4K2Q12851 820 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 IDI1Q13907 227 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 PUM1Q14671 1186 aaKnown RBP eCLIP7.77□□□□□ -1.17
C9orf3-205ENST00000427193 SURF1Q15526 300 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 PRAMEF18Q5VWM3 479 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 DENND5AQ6IQ26 1287 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 ARRDC4Q8NCT1 418 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 PHOSPHO1Q8TCT1 267 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 CLIC6Q96NY7 704 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 WRNIP1Q96S55 665 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 SIN3AQ96ST3 1273 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 CEP152O94986 1710 aa7.77□□□□□ -1.17
C9orf3-205ENST00000427193 MAFKO60675 156 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 GJB6O95452 261 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 FGRP09769 529 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 SLC10A6Q3KNW5 377 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 CPZQ66K79 652 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.76□□□□□ -1.17
C9orf3-205ENST00000427193 KCTD13Q8WZ19 329 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 LOXL4Q96JB6 756 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 C1QTNF3Q9BXJ4 246 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 ZNF408Q9H9D4 720 aa7.76□□□□□ -1.17
C9orf3-205ENST00000427193 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 PPP2R2AP63151 447 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 CYP4F22Q6NT55 531 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 PLEKHH3Q7Z736 793 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 TMEM209Q96SK2 561 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 TMPRSS5Q9H3S3 457 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 SMOC1Q9H4F8 434 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 L2HGDHQ9H9P8 463 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 SLC52A1Q9NWF4 448 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 MYOTQ9UBF9 498 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 TBX22Q9Y458 520 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 ZNF536O15090 1300 aa7.75□□□□□ -1.17
C9orf3-205ENST00000427193 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.75□□□□□ -1.17
C9orf3-205ENST00000427193 PLEKHG1Q9ULL1 1385 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 C1QTNF3-AMACRE9PGA6 284 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 CYP1A1P04798 512 aaPredicted RBP7.74□□□□□ -1.17
C9orf3-205ENST00000427193 GLB1LQ6UWU2 654 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 YTHDC1Q96MU7 727 aaKnown RBP7.74□□□□□ -1.17
C9orf3-205ENST00000427193 SSBP3Q9BWW4 388 aaPredicted RBP7.74□□□□□ -1.17
C9orf3-205ENST00000427193 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 GPR27Q9NS67 375 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 HSPBP1Q9NZL4 362 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 CCDC144AA2RUR9 1427 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 DCCP43146 1447 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 SPHKAPQ2M3C7 1700 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 CLTCL1P53675 1640 aa7.74□□□□□ -1.17
C9orf3-205ENST00000427193 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 KRIT1O00522 736 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 LAMTOR5O43504 91 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 LRG1P02750 347 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 TCF3P15923 654 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 IL13P35225 146 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 GRIA2P42262 883 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 ARID5AQ03989 594 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 ZSWIM3Q96MP5 696 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 C8orf49Q96NF6 230 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 TMEM168Q9H0V1 697 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
C9orf3-205ENST00000427193 R3HCC1Q9Y3T6 440 aaKnown RBP7.73□□□□□ -1.17
C9orf3-205ENST00000427193 ZFYVE9O95405 1425 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 MST1RQ04912 1400 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 A0A1W2PQU0 124 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 B4GALT3O60512 393 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 ZNF20P17024 532 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 RSPO2Q6UXX9 243 aaPredicted RBP7.72□□□□□ -1.17
C9orf3-205ENST00000427193 TRIM48Q8IWZ4 208 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 CHST13Q8NET6 341 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 TTLL11Q8NHH1 800 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 DDX17Q92841 729 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms