RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 JAK2O60674 1132 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 EFCAB14O75071 495 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 PSMD10O75832 226 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 TAP1Q03518 808 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 NONOQ15233 471 aaKnown RBP eCLIP20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 INF2Q27J81 1249 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 FAM160B1Q5W0V3 765 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 PPP2R2DQ66LE6 453 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 B3GNT9Q6UX72 402 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 SPRED2Q7Z698 418 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 SMAP1Q8IYB5 467 aaPredicted RBP20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 SLC17A8Q8NDX2 589 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 MAFAQ8NHW3 353 aaPredicted RBP20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 SEPT8Q92599 483 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 TNPO1Q92973 898 aaKnown RBP20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 RIT2Q99578 217 aa20.76■□□□□ 0.91
SMARCAL1-205ENST00000425815 GJB5O95377 273 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 PSAPP07602 524 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 KLRC1P26715 233 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 LPIN1Q14693 890 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 MOXD1Q6UVY6 613 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 KRT25Q7Z3Z0 450 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 ETNPPLQ8TBG4 499 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 TNFRSF25Q93038 417 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 FAM49AQ9H0Q0 323 aaPredicted RBP20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 UNC45AQ9H3U1 944 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 GABBR1Q9UBS5 961 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 CDY2AQ9Y6F7 541 aa20.75■□□□□ 0.91
SMARCAL1-205ENST00000425815 SMIM35A0A1B0GVV1 85 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 EPOPA6NHQ4 379 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 KIF28PB7ZC32 967 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 SLC37A4O43826 429 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 TLL1O43897 1013 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 ZNF862O60290 1169 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 GHRP10912 638 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 MRPS6P82932 125 aaKnown RBP20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 FBXO47Q5MNV8 452 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 RSPH3Q86UC2 560 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 DISC1Q9NRI5 854 aa20.74■□□□□ 0.91
SMARCAL1-205ENST00000425815 WDR64B1ANS9 1081 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 RFXAPO00287 272 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 GAS7O60861 476 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 XBP1P17861 261 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 LETM2Q2VYF4 491 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 ZNF484Q5JVG2 852 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 LRCH2Q5VUJ6 765 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 KIAA0319LQ8IZA0 1049 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 BBXQ8WY36 941 aaPredicted RBP20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 WASF1Q92558 559 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 RAD9AQ99638 391 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 IFIH1Q9BYX4 1025 aaKnown RBP20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 AGO3Q9H9G7 860 aaKnown RBP20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 CERS4Q9HA82 394 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 LIMCH1Q9UPQ0 1083 aa20.73■□□□□ 0.91
SMARCAL1-205ENST00000425815 FAM205CA6NFA0 338 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 TMEM62Q0P6H9 643 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 NR5A1Q13285 461 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 UGCGQ16739 394 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 FAM117BQ6P1L5 589 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 PIK3AP1Q6ZUJ8 805 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 TRMT1LQ7Z2T5 733 aaKnown RBP20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 MYOCDQ8IZQ8 938 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 NME8Q8N427 588 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 USP38Q8NB14 1042 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 APBB2Q92870 758 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 TOP1MTQ969P6 601 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 ZBED2Q9BTP6 218 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 TEKT3Q9BXF9 490 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 CDHR5Q9HBB8 845 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 DDX25Q9UHL0 483 aaKnown RBP20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 SAMM50Q9Y512 469 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 IGSF9BQ9UPX0 1349 aa20.72■□□□□ 0.91
SMARCAL1-205ENST00000425815 CCDC194A0A1B0GVG4 234 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 CHMP2AO43633 222 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 STBD1O95210 358 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 C22orf31O95567 290 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 AMHP03971 560 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 RBM25P49756 843 aaKnown RBP20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 IER5Q5VY09 327 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 PPP4R3AQ6IN85 833 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 NEK8Q86SG6 692 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 CKAP2LQ8IYA6 745 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 KCNMB3Q9NPA1 279 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 TRPV2Q9Y5S1 764 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 A0A0C4DFX4 3053 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 COL1A2P08123 1366 aa20.71■□□□□ 0.91
SMARCAL1-205ENST00000425815 ENPP3O14638 875 aa20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 RPLP2P05387 115 aaKnown RBP20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 SFNP31947 248 aa20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 HTRA4P83105 476 aaPredicted RBP20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 TSHZ1Q6ZSZ6 1077 aa20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 RTN4RL1Q86UN2 441 aaPredicted RBP20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 HAS1Q92839 578 aa20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 CELF4Q9BZC1 486 aaKnown RBP20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 PRUNE2Q8WUY3 3088 aa20.7■□□□□ 0.9
SMARCAL1-205ENST00000425815 BTBD18B2RXH4 712 aa20.69■□□□□ 0.9
SMARCAL1-205ENST00000425815 EML1O00423 815 aa20.69■□□□□ 0.9
SMARCAL1-205ENST00000425815 MMP1P03956 469 aa20.69■□□□□ 0.9
SMARCAL1-205ENST00000425815 CD52P31358 61 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms