RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 AKAP3O75969 853 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 RSPH10BP0C881 870 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 GCFC2P16383 781 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ABCB4P21439 1286 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 IBSPP21815 317 aaPredicted RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 HSPA9P38646 679 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 IKQ13123 557 aaPredicted RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ITGB3BPQ13352 177 aaPredicted RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 KNOP1Q1ED39 458 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 VPS36Q86VN1 386 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 RBM46Q8TBY0 533 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 IKZF4Q9H2S9 585 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 TMBIM4Q9HC24 238 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 USP40Q9NVE5 1235 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 NOVA2Q9UNW9 492 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 TTI1O43156 1089 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 PHLPP1O60346 1717 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 GCNT3O95395 438 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ATP2B4P23634 1241 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 KCNA1Q09470 495 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 QRICH1Q2TAL8 776 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 MCTP2Q6DN12 878 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ARFGAP2Q8N6H7 521 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 TPCN2Q8NHX9 752 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 SCFD2Q8WU76 684 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.22□□□□□ -1.092e-7■■□□□ 11.9
SMARCC1-202ENST00000425518 REEP2Q9BRK0 252 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ANO3Q9BYT9 981 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 POLLQ9UGP5 575 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 SNHG28P0DPA3 235 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 TAL1P17542 331 aaPredicted RBP8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 COPB2P35606 906 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 SLC12A3P55017 1021 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 IFFO1Q0D2I5 559 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 GIT2Q14161 759 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 UAP1Q16222 522 aaPredicted RBP8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 USH1GQ495M9 461 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 SLC30A10Q6XR72 485 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 CD302Q8IX05 232 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 GPATCH11Q8N954 259 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 PLCB1Q9NQ66 1216 aa8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 AJAP1Q9UKB5 411 aaPredicted RBP8.21□□□□□ -1.09
SMARCC1-202ENST00000425518 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 CUL1Q13616 776 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 EDRF1Q3B7T1 1238 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 KRT71Q3SY84 523 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 KCNV1Q6PIU1 500 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM196AQ6ZSG2 479 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 CERKQ8TCT0 537 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 LMBR1Q8WVP7 490 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 BHMT2Q9H2M3 363 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 GOPCQ9HD26 462 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 GCNT4Q9P109 453 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 TMEM59LQ9UK28 342 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 BZW2Q9Y6E2 419 aaKnown RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 KIAA1551Q9HCM1 1747 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 SCN7AQ01118 1682 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 CALUO43852 315 aaPredicted RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 IL1R1P14778 569 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 SETQ01105 290 aaPredicted RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 ZNF844Q08AG5 666 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 SHROOM1Q2M3G4 852 aaPredicted RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 C10orf76Q5T2E6 689 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 GPATCH4Q5T3I0 446 aaKnown RBP8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 FOXR2Q6PJQ5 311 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 PPP4R3CPQ6ZMV5 832 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 FRMD5Q7Z6J6 570 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 LRRC57Q8N9N7 239 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC26Q8TAB7 109 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 TBC1D22AQ8WUA7 517 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.1
SMARCC1-202ENST00000425518 GOLGA6L7A0A1B0GV03 622 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 DDX3XO00571 662 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 TBCAO75347 108 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 FGGP02679 453 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 NR3C1P04150 777 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ECHS1P30084 290 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 HOXA7P31268 230 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ZNF76P36508 570 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 USP8P40818 1118 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 NOVP48745 357 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 GALCP54803 685 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 MAGOHP61326 146 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 GABPAQ06546 454 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 TCP10Q12799 353 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 HYIQ5T013 277 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 PRR5LQ6MZQ0 368 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 RUFY4Q6ZNE9 571 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 BARGINQ6ZT62 677 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 GLYCTKQ8IVS8 523 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 SUGP1Q8IWZ8 645 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ERMNQ8TAM6 284 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 TBC1D16Q8TBP0 767 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ACTRT1Q8TDG2 376 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms