RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MAMDC2Q7Z304 686 aaPredicted RBP7.65□□□□□ -1.18
LINC01040-201ENST00000425048 MTDHQ86UE4 582 aaKnown RBP7.65□□□□□ -1.18
LINC01040-201ENST00000425048 C1orf210Q8IVY1 113 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 PTPRN2Q92932 1015 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 OR14A2Q96R54 314 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 SPATA9Q9BWV2 254 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 GSTA4O15217 222 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 ARHGAP6O43182 974 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 ZNF202O95125 648 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 PDE6AP16499 860 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 MCM7P33993 719 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 C16orf59Q7L2K0 433 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 PLA2G12BQ9BX93 195 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 MSL2Q9HCI7 577 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 INCENPQ9NQS7 918 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 PUF60Q9UHX1 559 aaKnown RBP7.64□□□□□ -1.19
LINC01040-201ENST00000425048 PCDHA8Q9Y5H6 950 aa7.64□□□□□ -1.19
LINC01040-201ENST00000425048 MAN2B1O00754 1011 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 NARSO43776 548 aaKnown RBP7.63□□□□□ -1.19
LINC01040-201ENST00000425048 HMGCRP04035 888 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 AMY2AP04746 511 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 NAT1P18440 290 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 AMY2BP19961 511 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 KCNQ1P51787 676 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 ST5P78524 1137 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 USP30Q70CQ3 517 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 PTRH1Q86Y79 214 aaKnown RBP7.63□□□□□ -1.19
LINC01040-201ENST00000425048 PCDH19Q8TAB3 1148 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 WDR48Q8TAF3 677 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 WNK4Q96J92 1243 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 IPO9Q96P70 1041 aaKnown RBP7.63□□□□□ -1.19
LINC01040-201ENST00000425048 CDC6Q99741 560 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 TRIM55Q9BYV6 548 aa7.63□□□□□ -1.19
LINC01040-201ENST00000425048 WDR33Q9C0J8 1336 aaKnown RBP7.62□□□□□ -1.19
LINC01040-201ENST00000425048 MATN2O00339 956 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 PYGMP11217 842 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 KRT15P19012 456 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 IL13RA1P78552 427 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 PURAQ00577 322 aaKnown RBP7.62□□□□□ -1.19
LINC01040-201ENST00000425048 GUCY1A3Q02108 690 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 DUSP8Q13202 625 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 EIF4HQ15056 248 aaKnown RBP7.62□□□□□ -1.19
LINC01040-201ENST00000425048 CRY1Q16526 586 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 TBR1Q16650 682 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 FIGNQ5HY92 759 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 IGFL4Q6B9Z1 124 aa7.62□□□□□ -1.19
LINC01040-201ENST00000425048 ADCY8P40145 1251 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 JAM2P57087 298 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 HERVK_113P62684 666 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 DGCR2P98153 550 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 STILQ15468 1287 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 LARP4Q71RC2 724 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC01040-201ENST00000425048 PLEKHG4BQ96PX9 1271 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 BTBD2Q9BX70 525 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 C11orf21Q9P2W6 132 aa7.61□□□□□ -1.19
LINC01040-201ENST00000425048 TRBV23-1A0A0A0MS06 115 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 PRAMEF25A6NGN4 478 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 CLASP2O75122 1294 aaKnown RBP7.6□□□□□ -1.19
LINC01040-201ENST00000425048 C4BPAP04003 597 aaKnown RBP7.6□□□□□ -1.19
LINC01040-201ENST00000425048 SRGAP2CP0DJJ0 459 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 ACRV1P26436 265 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 AOAHP28039 575 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 DPTQ07507 201 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 TRIM68Q6AZZ1 485 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 OTOP2Q7RTS6 562 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 AMER2Q8N7J2 671 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 IL17DQ8TAD2 202 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 CHFRQ96EP1 664 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 NELFAQ9H3P2 528 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 BTBD7Q9P203 1132 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 CDC42EP3Q9UKI2 254 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 CBLCQ9ULV8 474 aa7.6□□□□□ -1.19
LINC01040-201ENST00000425048 ARVCFO00192 962 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 HIBADHP31937 336 aaKnown RBP7.59□□□□□ -1.19
LINC01040-201ENST00000425048 MEOX1P50221 254 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 SUMO1P63165 101 aaKnown RBP7.59□□□□□ -1.19
LINC01040-201ENST00000425048 FOXL1Q12952 345 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 FAM47CQ5HY64 1035 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 SPATC1Q76KD6 591 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 ZNF808Q8N4W9 903 aaPredicted RBP7.59□□□□□ -1.19
LINC01040-201ENST00000425048 CFHR4Q92496 578 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 TRIM8Q9BZR9 551 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 KIAA1683Q9H0B3 1180 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 PLA2G3Q9NZ20 509 aa7.59□□□□□ -1.19
LINC01040-201ENST00000425048 A0A0G2JNJ9 132 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 U2SURPO15042 1029 aaKnown RBP7.58□□□□□ -1.2
LINC01040-201ENST00000425048 PDPK1O15530 556 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 C1SP09871 688 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 ECE1P42892 770 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 HHEXQ03014 270 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 PCOLCEQ15113 449 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 FAM209AQ5JX71 171 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 RTKN2Q8IZC4 609 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 ZBTB38Q8NAP3 1195 aaPredicted RBP7.58□□□□□ -1.2
LINC01040-201ENST00000425048 CEP89Q96ST8 783 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 OR10A2Q9H208 303 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 AURKAIP1Q9NWT8 199 aaPredicted RBP7.58□□□□□ -1.2
LINC01040-201ENST00000425048 Q9UFV3 132 aa7.58□□□□□ -1.2
LINC01040-201ENST00000425048 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 ADCY3O60266 1144 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms