RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FCRL3Q96P31 734 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 SERINC2Q96SA4 455 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 HAUS7Q99871 368 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 LGR4Q9BXB1 951 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 GBP3Q9H0R5 595 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PHAXQ9H814 394 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 NCOA5Q9HCD5 579 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 NLRC4Q9NPP4 1024 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 RIC8AQ9NPQ8 531 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 WHRNQ9P202 907 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 RCAN3Q9UKA8 241 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 ACAD8Q9UKU7 415 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PNMA8BQ9ULN7 279 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 IPPQ9Y573 584 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 WASHC2AQ641Q2 1341 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 A0A087WZG4 1122 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 A0A0G2JLL6 359 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 A0A1W2PQJ5 194 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 IQCA1LA6NCM1 817 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 NPTXRO95502 500 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 TBC1D8O95759 1140 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 CYBBP04839 570 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 HNRNPCP07910 306 aaKnown RBP eCLIP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 FAM153BP0C7A2 387 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 SERPINB3P29508 390 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 L1CAMP32004 1257 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 ZNF200P98182 395 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 TCIRG1Q13488 830 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 DHCR24Q15392 516 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 TAF11Q15544 211 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 ELF2Q15723 593 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 COBLL1Q53SF7 1204 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 WDR45BQ5MNZ6 344 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 HEATR6Q6AI08 1181 aaKnown RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 BICRALQ6AI39 1079 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 CFAP161Q6P656 301 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 PAQR3Q6TCH7 311 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 RSRC2Q7L4I2 434 aaKnown RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 EEPD1Q7L9B9 569 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 MAATS1Q7Z4T9 603 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 ADAT2Q7Z6V5 191 aaKnown RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 LRRTM3Q86VH5 581 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 CLASRPQ8N2M8 674 aaKnown RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 CHCHD4Q8N4Q1 142 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 USP33Q8TEY7 942 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 RSPH1Q8WYR4 309 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 RPGRQ92834 1020 aaKnown RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 PGBD4Q96DM1 585 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 C20orf173Q96LM9 149 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 SPATA9Q9BWV2 254 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 KLHL25Q9H0H3 589 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 PDLIM7Q9NR12 457 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 RASSF1Q9NS23 344 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 KLHL11Q9NVR0 708 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 DIS3Q9Y2L1 958 aaKnown RBP4.42□□□□□ -1.7
SF3B1-205ENST00000424674 SLC45A1Q9Y2W3 748 aa4.42□□□□□ -1.7
SF3B1-205ENST00000424674 BUB1BO60566 1050 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-205ENST00000424674 VAMP4O75379 141 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 SASH1O94885 1247 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 FBXO21O94952 628 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 RHOBTB3O94955 611 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 EPHX1P07099 455 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 PFKLP17858 780 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 ATICP31939 592 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 RENBPP51606 427 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 NCKAP1LP55160 1127 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 STRN3Q13033 797 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 RCSD1Q6JBY9 416 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 KIAA1211LQ6NV74 962 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 CNNM4Q6P4Q7 775 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 STRA8Q7Z7C7 330 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 MYLK4Q86YV6 388 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-205ENST00000424674 FAM178BQ8IXR5 827 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 SP8Q8IXZ3 490 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 KIAA1958Q8N8K9 716 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 ZBTB38Q8NAP3 1195 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-205ENST00000424674 KLHL6Q8WZ60 621 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 GOLGA1Q92805 767 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 MAN1C1Q9NR34 630 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 TRHDEQ9UKU6 1024 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 PHTF1Q9UMS5 762 aa4.41□□□□□ -1.7
SF3B1-205ENST00000424674 ABHD14A-ACY1A0A1B0GW23 586 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 B2RBV5 119 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 STXBP3O00186 592 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 APAF1O14727 1248 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 GABRDO14764 452 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 AURKAO14965 403 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 SNX2O60749 519 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 SETSIPP0DME0 302 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 IGFBP6P24592 240 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 TACR1P25103 407 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 SLC7A5Q01650 507 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 STAT4Q14765 748 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 KIF22Q14807 665 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 NFIXQ14938 502 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 PDCD2Q16342 344 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 VMACQ2NL98 169 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 DPY19L1Q2PZI1 675 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms