RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MYL3P08590 195 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 SLFN14P0C7P3 912 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 PLA2G4BP0C869 781 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 YWHABP31946 246 aaKnown RBP15.01□□□□□ -0.01
PRPF39-202ENST00000424478 STAT5BP51692 787 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 LAMC2Q13753 1193 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 MYMKA6NI61 221 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 CTAGE5O15320 804 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 SEPT4O43236 478 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 SFNP31947 248 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 GNASQ5JWF2 1037 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 SMAP1Q8IYB5 467 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-202ENST00000424478 POLR3CQ9BUI4 534 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-202ENST00000424478 XPNPEP3Q9NQH7 507 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 PCDH10Q9P2E7 1040 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 RSPH10B2B2RC85 870 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 ATG7O95352 703 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 RSPH10BP0C881 870 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 PSMC5P62195 406 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 ZSCAN23Q3MJ62 389 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 CXCL17Q6UXB2 119 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 GIMAP8Q8ND71 665 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-202ENST00000424478 ZHX3Q9H4I2 956 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 ZSWIM4Q9H7M6 989 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 DNM3Q9UQ16 869 aa15.01□□□□□ -0.01
PRPF39-202ENST00000424478 USO1O60763 962 aaKnown RBP15□□□□□ -0.01
PRPF39-202ENST00000424478 XKR9Q5GH70 373 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 SLAIN1Q8ND83 568 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 PPTC7Q8NI37 304 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 PXYLP1Q8TE99 480 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 ZNF668Q96K58 619 aaPredicted RBP15□□□□□ -0.01
PRPF39-202ENST00000424478 AP5M1Q9H0R1 490 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 AZI2Q9H6S1 392 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 GPRC5CQ9NQ84 441 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 STBD1O95210 358 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 GNRH1P01148 92 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 RARBP10826 455 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 CTCFP49711 727 aaPredicted RBP15□□□□□ -0.01
PRPF39-202ENST00000424478 ARHGEF6Q15052 776 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 FSCN1Q16658 493 aaKnown RBP15□□□□□ -0.01
PRPF39-202ENST00000424478 ARSHQ5FYA8 562 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 GPBP1Q86WP2 473 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 SMYD4Q8IYR2 804 aaPredicted RBP15□□□□□ -0.01
PRPF39-202ENST00000424478 TUFT1Q9NNX1 390 aa15□□□□□ -0.01
PRPF39-202ENST00000424478 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
PRPF39-202ENST00000424478 POSTNQ15063 836 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 C16orf70Q9BSU1 422 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 TBC1D7Q9P0N9 293 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 PCDHA5Q9Y5H7 936 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 KDM3AQ9Y4C1 1321 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 IDEP14735 1019 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 SLC12A3P55017 1021 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 HYIQ5T013 277 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 DEFB118Q96PH6 123 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 HMX1Q9NP08 348 aaPredicted RBP14.99□□□□□ -0.01
PRPF39-202ENST00000424478 MAFBQ9Y5Q3 323 aaPredicted RBP14.99□□□□□ -0.01
PRPF39-202ENST00000424478 IGSF9BQ9UPX0 1349 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 IGKV6D-21A0A0A0MT36 114 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 CTU1Q7Z7A3 348 aaKnown RBP14.99□□□□□ -0.01
PRPF39-202ENST00000424478 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 PPP1R16BQ96T49 567 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 NT5C3AQ9H0P0 336 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 RNF208Q9H0X6 261 aa14.99□□□□□ -0.01
PRPF39-202ENST00000424478 DDX20Q9UHI6 824 aaKnown RBP14.99□□□□□ -0.01
PRPF39-202ENST00000424478 DUSP11O75319 330 aaKnown RBP14.98□□□□□ -0.01
PRPF39-202ENST00000424478 RARRES1P49788 294 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 SV2BQ7L1I2 683 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 GLIS3Q8NEA6 775 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 DDX12PQ92771 950 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 ATP6V0A1Q93050 837 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 KBTBD4Q9NVX7 518 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 MAPK8IP1Q9UQF2 711 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 TRIP12Q14669 1992 aaPredicted RBP14.98□□□□□ -0.01
PRPF39-202ENST00000424478 H3BRB1 525 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 CYP11B2P19099 503 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 DRP2Q13474 957 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 SKOR2Q2VWA4 1001 aaPredicted RBP14.98□□□□□ -0.01
PRPF39-202ENST00000424478 KAT2BQ92831 832 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 CCDC43Q96MW1 224 aaKnown RBP14.98□□□□□ -0.01
PRPF39-202ENST00000424478 NACC1Q96RE7 527 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 TUT1Q9H6E5 874 aaKnown RBP14.98□□□□□ -0.01
PRPF39-202ENST00000424478 EVPLQ92817 2033 aa14.98□□□□□ -0.01
PRPF39-202ENST00000424478 A6NJR5 290 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 OATP04181 439 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 GJB1P08034 283 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 ASIC1P78348 528 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 ZNF200P98182 395 aaPredicted RBP14.97□□□□□ -0.01
PRPF39-202ENST00000424478 HIC1Q14526 733 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 DGKDQ16760 1214 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 LHX8Q68G74 356 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 FGFBP2Q9BYJ0 223 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.97□□□□□ -0.01
PRPF39-202ENST00000424478 ARHGEF35A5YM69 484 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 ADAMTS4O75173 837 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 KRT18P05783 430 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms