RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 DNAJB3Q8WWF6 145 aa20.2■□□□□ 0.82
SBDSP1-202ENST00000423945 PRUNE2Q8WUY3 3088 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 FAM205CA6NFA0 338 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 PSMD10O75832 226 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 KCNJ6P48051 423 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 RBM25P49756 843 aaKnown RBP20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 IKBKEQ14164 716 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 FAM160B1Q5W0V3 765 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 PDXDC2PQ6P474 469 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 MOXD1Q6UVY6 613 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 SMAP1Q8IYB5 467 aaPredicted RBP20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 ETNPPLQ8TBG4 499 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 TNFRSF25Q93038 417 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 RIT2Q99578 217 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 UNC45AQ9H3U1 944 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 SLC28A3Q9HAS3 691 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 PCDHA2Q9Y5H9 948 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 PCDHA10Q9Y5I2 948 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
SBDSP1-202ENST00000423945 SLC37A4O43826 429 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 HBP1O60381 514 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 CA3P07451 260 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 NR5A1Q13285 461 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 MTHFD1LQ6UB35 978 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 WASF1Q92558 559 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 CDY2AQ9Y6F7 541 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 CUL9Q8IWT3 2517 aa20.18■□□□□ 0.82
SBDSP1-202ENST00000423945 TRANK1O15050 2925 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 ZNF862O60290 1169 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 PSAPP07602 524 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 XBP1P17861 261 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 UGCGQ16739 394 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 PPP2R2DQ66LE6 453 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 SPRED2Q7Z698 418 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 TEKT3Q9BXF9 490 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 FAM49AQ9H0Q0 323 aaPredicted RBP20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 DISC1Q9NRI5 854 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
SBDSP1-202ENST00000423945 CCDC194A0A1B0GVG4 234 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 SMIM35A0A1B0GVV1 85 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 LCHNA4D1U4 455 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 WDR64B1ANS9 1081 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 DLL1O00548 723 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 GAS7O60861 476 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 GHRP10912 638 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 FOSL2P15408 326 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 KLRC1P26715 233 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 MRPS6P82932 125 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 LPIN1Q14693 890 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 LETM2Q2VYF4 491 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 FBXO47Q5MNV8 452 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 NEK8Q86SG6 692 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 SEPT8Q92599 483 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 TNPO1Q92973 898 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 COL1A2P08123 1366 aa20.16■□□□□ 0.82
SBDSP1-202ENST00000423945 CHMP2AO43633 222 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 EFCAB14O75071 495 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 GJB5O95377 273 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 FOSBP53539 338 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 TAP1Q03518 808 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 TMEM62Q0P6H9 643 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 ZNF484Q5JVG2 852 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 RSPH3Q86UC2 560 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 BBXQ8WY36 941 aaPredicted RBP20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 IFIH1Q9BYX4 1025 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 DDX25Q9UHL0 483 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 SAMM50Q9Y512 469 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 UNC80Q8N2C7 3258 aa20.15■□□□□ 0.82
SBDSP1-202ENST00000423945 TLL1O43897 1013 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 C22orf31O95567 290 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 MMP1P03956 469 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 KRT2P35908 639 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 KRT40Q6A162 431 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 PPP4R3AQ6IN85 833 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 TRMT1LQ7Z2T5 733 aaKnown RBP20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 KIAA0319LQ8IZA0 1049 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 MAFAQ8NHW3 353 aaPredicted RBP20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 AGO3Q9H9G7 860 aaKnown RBP20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 KCNMB3Q9NPA1 279 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 TCEAL9Q9UHQ7 104 aa20.14■□□□□ 0.81
SBDSP1-202ENST00000423945 REV3LO60673 3130 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 EPOPA6NHQ4 379 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 BTBD18B2RXH4 712 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 WNT7AO00755 349 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 STBD1O95210 358 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 SFNP31947 248 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 JAK3P52333 1124 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 FAM117BQ6P1L5 589 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 CKAP2LQ8IYA6 745 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 HAS1Q92839 578 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 CERS4Q9HA82 394 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms