RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 AP1M1Q9BXS5 423 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 RNF14Q9UBS8 474 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 POLRMTO00411 1230 aaKnown RBP17.3■□□□□ 0.36
CDH1-202ENST00000422392 GDF11O95390 407 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 HOXA7P31268 230 aaPredicted RBP17.3■□□□□ 0.36
CDH1-202ENST00000422392 MAGEA9P43362 315 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 IKQ13123 557 aaPredicted RBP17.3■□□□□ 0.36
CDH1-202ENST00000422392 PAK2Q13177 524 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 PACS2Q86VP3 889 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 IQCKQ8N0W5 287 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 TEKT1Q969V4 418 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 RUSC1Q9BVN2 902 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 BHMT2Q9H2M3 363 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 NAGPAQ9UK23 515 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 PITPNM2Q9BZ72 1349 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 CYP3A7-CYP3A51PA0A087WV96 503 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 EPB41P11171 864 aaKnown RBP17.3■□□□□ 0.36
CDH1-202ENST00000422392 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
CDH1-202ENST00000422392 CYP3A7P24462 503 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 RPS6KA1Q15418 735 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDH1-202ENST00000422392 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 KIAA0825Q8IV33 1275 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 RGL1Q9NZL6 768 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
CDH1-202ENST00000422392 LRRC37AA6NMS7 1700 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 CEP104O60308 925 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 GCNT3O95395 438 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 ADRA2BP18089 450 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
CDH1-202ENST00000422392 ALKBH5Q6P6C2 394 aaKnown RBP17.29■□□□□ 0.36
CDH1-202ENST00000422392 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 SYT2Q8N9I0 419 aaPredicted RBP17.29■□□□□ 0.36
CDH1-202ENST00000422392 CRYGNQ8WXF5 182 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 TAF4BQ92750 862 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 ASTN1O14525 1302 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 ZEB2O60315 1214 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 KIF4AO95239 1232 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 RPA1P27694 616 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 KSR1Q8IVT5 923 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 PIGOQ8TEQ8 1089 aa17.29■□□□□ 0.36
CDH1-202ENST00000422392 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 EML1O00423 815 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 NR3C1P04150 777 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 CRKP46108 304 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 GUCY1A3Q02108 690 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 HLTFQ14527 1009 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDH1-202ENST00000422392 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
CDH1-202ENST00000422392 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 RNPC3Q96LT9 517 aaKnown RBP17.28■□□□□ 0.36
CDH1-202ENST00000422392 MBOAT7Q96N66 472 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 NAP1L4Q99733 375 aaKnown RBP17.28■□□□□ 0.36
CDH1-202ENST00000422392 GCNT4Q9P109 453 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 TMCO5BA8MYB1 307 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 G3V3G9 751 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 ZBTB39O15060 712 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 MSH4O15457 936 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 RBM5P52756 815 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDH1-202ENST00000422392 EPHA7Q15375 998 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 DDX47Q9H0S4 455 aaKnown RBP17.28■□□□□ 0.36
CDH1-202ENST00000422392 SIX2Q9NPC8 291 aa17.28■□□□□ 0.36
CDH1-202ENST00000422392 GBP6Q6ZN66 633 aa17.27■□□□□ 0.36
CDH1-202ENST00000422392 LRRC57Q8N9N7 239 aa17.27■□□□□ 0.36
CDH1-202ENST00000422392 SLC35C1Q96A29 364 aa17.27■□□□□ 0.36
CDH1-202ENST00000422392 CENPHQ9H3R5 247 aa17.27■□□□□ 0.36
CDH1-202ENST00000422392 TMEM59LQ9UK28 342 aa17.27■□□□□ 0.36
CDH1-202ENST00000422392 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.36
CDH1-202ENST00000422392 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 F5H6K3 240 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 EBAG9O00559 213 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 TNNC1P63316 161 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 ICA1Q05084 483 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 KLRC3Q07444 240 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 SH3BP5LQ7L8J4 393 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 MAATS1Q7Z4T9 603 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 METTL13Q8N6R0 699 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 ERMNQ8TAM6 284 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 PLCB1Q9NQ66 1216 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 SUGT1Q9Y2Z0 365 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 FAM169AQ9Y6X4 670 aa17.27■□□□□ 0.35
CDH1-202ENST00000422392 GFPT2O94808 682 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 ITGA4P13612 1032 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 ECHS1P30084 290 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 SKOR1P84550 965 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 CTTNQ14247 550 aaKnown RBP17.26■□□□□ 0.35
CDH1-202ENST00000422392 ZC2HC1CQ53FD0 456 aaPredicted RBP17.26■□□□□ 0.35
CDH1-202ENST00000422392 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 CCDC17Q96LX7 622 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms