RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 EPHB1P54762 984 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 PPP1R2P3Q6NXS1 205 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 FAM81BQ96LP2 452 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 PIGSQ96S52 555 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 KRT37O76014 449 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 BRAFP15056 766 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 MID2Q9UJV3 735 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 MXI1P50539 228 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 ZBTB41Q5SVQ8 909 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 MCF2L2Q86YR7 1114 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 ASPRV1Q53RT3 343 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
CLCN4-203ENST00000421085 SLC38A10Q9HBR0 1119 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 SEPT9Q9UHD8 586 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-203ENST00000421085 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 GCFC2P16383 781 aaKnown RBP13.26□□□□□ -0.29
CLCN4-203ENST00000421085 DYNLL1P63167 89 aaKnown RBP13.26□□□□□ -0.29
CLCN4-203ENST00000421085 NR1H3Q13133 447 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-203ENST00000421085 PRKG1Q13976 671 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 HACE1Q8IYU2 909 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 ICA1LQ8NDH6 482 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 ARHGAP10A1A4S6 786 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 TEX33O43247 280 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 FSCBQ5H9T9 825 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 FAF2Q96CS3 445 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
CLCN4-203ENST00000421085 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 PYGBP11216 843 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 EPN3Q9H201 632 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ENO4A6NNW6 628 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ARL4AP40617 200 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
CLCN4-203ENST00000421085 KIF19Q2TAC6 998 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
CLCN4-203ENST00000421085 KCTD1Q719H9 257 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 COA7Q96BR5 231 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 HEMGNQ9BXL5 484 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
CLCN4-203ENST00000421085 DDIT3P35638 169 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ARL4CP56559 192 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 DRP2Q13474 957 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ING2Q9H160 280 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 GGT7Q9UJ14 662 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 PRPSAP2O60256 369 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 TJP3O95049 919 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ZBED1O96006 694 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 PTPREP23469 700 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 PRCPP42785 496 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ARFIP2P53365 341 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ANO5Q75V66 913 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF473Q8WTR7 871 aaKnown RBP13.25□□□□□ -0.29
CLCN4-203ENST00000421085 ZDHHC9Q9Y397 364 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
CLCN4-203ENST00000421085 CCDC195A0A1B0GUA6 201 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 GOLGA8MH3BSY2 632 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 TOM1O60784 492 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 LCORLQ8N3X6 602 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 KIFC3Q9BVG8 833 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 SCNN1DP51172 638 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 FBXL5Q9UKA1 691 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 SYCE1LA8MT33 242 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 MIF4GDA9UHW6 222 aaKnown RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 ELF1P32519 619 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF211Q13398 564 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 CCDC92Q53HC0 331 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 CFAP69A5D8W1 941 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 SLC16A2P36021 539 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 RYBPQ8N488 228 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 HSPH1Q92598 858 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 CD58P19256 250 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
CLCN4-203ENST00000421085 RNF169Q8NCN4 708 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 SLC26A7Q8TE54 656 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 GIPC2Q8TF65 315 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 NRBP2Q9NSY0 501 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 DNAJC12Q9UKB3 198 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 ADGRL2O95490 1459 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms