RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 IGBP1P78318 339 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 FBXO47Q5MNV8 452 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 GDPD5Q8WTR4 605 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
SSBP3-206ENST00000420121 LINC01599Q8WXQ3 324 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 APBB2Q92870 758 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
SSBP3-206ENST00000420121 IFIH1Q9BYX4 1025 aaKnown RBP12.56□□□□□ -0.4
SSBP3-206ENST00000420121 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 SUGCTQ9HAC7 445 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 PPP4R2Q9NY27 417 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 THEGQ9P2T0 379 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 CDY2AQ9Y6F7 541 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 M0R2N6 131 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 LINC00271P0C7V0 271 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 GNA11P29992 359 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 ZNF76P36508 570 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 MRPS6P82932 125 aaKnown RBP12.55□□□□□ -0.4
SSBP3-206ENST00000420121 TJAP1Q5JTD0 557 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 MCTP2Q6DN12 878 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 ATXN2LQ8WWM7 1075 aaKnown RBP12.55□□□□□ -0.4
SSBP3-206ENST00000420121 AIFM3Q96NN9 605 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 TGS1Q96RS0 853 aaKnown RBP12.55□□□□□ -0.4
SSBP3-206ENST00000420121 AGO3Q9H9G7 860 aaKnown RBP12.55□□□□□ -0.4
SSBP3-206ENST00000420121 RC3H2Q9HBD1 1191 aaKnown RBP12.55□□□□□ -0.4
SSBP3-206ENST00000420121 SH3GLB2Q9NR46 395 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 INSL6Q9Y581 213 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 PCDHA2Q9Y5H9 948 aa12.55□□□□□ -0.4
SSBP3-206ENST00000420121 POTEB3A0JP26 581 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 SLC26A2P50443 739 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-206ENST00000420121 AKAP17AQ02040 695 aaKnown RBP12.54□□□□□ -0.4
SSBP3-206ENST00000420121 ERICH6BQ5W0A0 696 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 POTEBQ6S5H4 581 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 MTHFD1LQ6UB35 978 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 MICALL1Q8N3F8 863 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 ATP8B4Q8TF62 1192 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 IL17RAQ96F46 866 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 C17orf80Q9BSJ5 609 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 ZNF577Q9BSK1 485 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 FAM49AQ9H0Q0 323 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-206ENST00000420121 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 MAFBQ9Y5Q3 323 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-206ENST00000420121 FNDC1Q4ZHG4 1894 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-206ENST00000420121 MYO7AQ13402 2215 aa12.54□□□□□ -0.4
SSBP3-206ENST00000420121 SMIM35A0A1B0GVV1 85 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 ENPP3O14638 875 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 MSH4O15457 936 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 GTPBP6O43824 516 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-206ENST00000420121 DTNBO60941 627 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 UPP2O95045 317 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 DEXIO95424 95 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 TFF2Q03403 129 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
SSBP3-206ENST00000420121 TMEM62Q0P6H9 643 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 SCRN1Q12765 414 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 STK3Q13188 491 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 PRR16Q569H4 304 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 ZNF746Q6NUN9 644 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-206ENST00000420121 SWSAP1Q6NVH7 229 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 TSHZ1Q6ZSZ6 1077 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 RTN4RL1Q86UN2 441 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-206ENST00000420121 DAGLBQ8NCG7 672 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 BICD2Q8TD16 824 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 ZNF302Q9NR11 478 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 SQORQ9Y6N5 450 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 IGSF9BQ9UPX0 1349 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 COL1A2P08123 1366 aa12.53□□□□□ -0.4
SSBP3-206ENST00000420121 BACH1O14867 736 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 HBP1O60381 514 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 RPLP2P05387 115 aaKnown RBP12.52□□□□□ -0.41
SSBP3-206ENST00000420121 KLRC1P26715 233 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 CD52P31358 61 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.418e-6■■■■□ 21.8
SSBP3-206ENST00000420121 USP11P51784 963 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 B3GNT9Q6UX72 402 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 TRIM22Q8IYM9 498 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 KIAA0319LQ8IZA0 1049 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 SLC5A5Q92911 643 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 GJA10Q969M2 543 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
SSBP3-206ENST00000420121 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 LMCD1Q9NZU5 365 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 PCDHA4Q9UN74 947 aa12.52□□□□□ -0.41
SSBP3-206ENST00000420121 CYP3A7-CYP3A51PA0A087WV96 503 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms