RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 FOXRED1Q96CU9 486 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 MBD6Q96DN6 1003 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 C20orf173Q96LM9 149 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 ADAM7Q9H2U9 754 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 ZCCHC4Q9H5U6 513 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 ARHGAP28Q9P2N2 729 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 DUSP10Q9Y6W6 482 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 KLHL18O94889 574 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 F2P00734 622 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 HOXA5P20719 270 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 PTX3P26022 381 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 FLT3P36888 993 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 KIF11P52732 1056 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 IL13RA1P78552 427 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 RGL3Q3MIN7 710 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 TRMT10BQ6PF06 316 aaKnown RBP6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 THNSL2Q86YJ6 484 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 SP8Q8IXZ3 490 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 GBP4Q96PP9 640 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 CABP5Q9NP86 173 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 INCENPQ9NQS7 918 aa6.5□□□□□ -1.37
HMGB1P49-201ENST00000418882 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 PDE8AO60658 829 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 SLC9A1P19634 815 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 SMAD2Q15796 467 aaKnown RBP6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 ARHGAP44Q17R89 818 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 EGFLAMQ63HQ2 1017 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 CC2D1AQ6P1N0 951 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 RNF180Q86T96 592 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 KIAA1958Q8N8K9 716 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 CHTF18Q8WVB6 975 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 ELF4Q99607 663 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 OXSMQ9NWU1 459 aa6.49□□□□□ -1.37
HMGB1P49-201ENST00000418882 GOLGA6L22H0YM25 854 aa6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 HIP1RO75146 1068 aa6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 FAM26FQ5R3K3 315 aa6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 ERCC4Q92889 916 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 WRNIP1Q96S55 665 aa6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 L2HGDHQ9H9P8 463 aa6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 GALNT8Q9NY28 637 aa6.48□□□□□ -1.37
HMGB1P49-201ENST00000418882 H7C1D1 291 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 TGM5O43548 720 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 FBXO21O94952 628 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 KANK2Q63ZY3 851 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 PPM1KQ8N3J5 372 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 UBR7Q8N806 425 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 SMC1BQ8NDV3 1235 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 HIPK4Q8NE63 616 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 C16orf92Q96LL3 132 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 THG1LQ9NWX6 298 aaKnown RBP6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 PTPN22Q9Y2R2 807 aa6.47□□□□□ -1.37
HMGB1P49-201ENST00000418882 PRICKLE3O43900 615 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 B4GALT3O60512 393 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 SASH1O94885 1247 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 MASP1P48740 699 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 STILQ15468 1287 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 STRA8Q7Z7C7 330 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 KIF18BQ86Y91 864 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 LEO1Q8WVC0 666 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 MS4A5Q9H3V2 200 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 ASB1Q9Y576 335 aa6.46□□□□□ -1.38
HMGB1P49-201ENST00000418882 LCHNA4D1U4 455 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 MROH6A6NGR9 719 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 ADCY8P40145 1251 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 ADCYAP1R1P41586 468 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 ECE1P42892 770 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 FNTBP49356 437 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 GJA9P57773 515 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 CD83Q01151 205 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 GPR155Q7Z3F1 870 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 FERMT3Q86UX7 667 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 GPR101Q96P66 508 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 FAM126AQ9BYI3 521 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 TMEM168Q9H0V1 697 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 PCIF1Q9H4Z3 704 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 SPTLC3Q9NUV7 552 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 FTSJ1Q9UET6 329 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 SPO11Q9Y5K1 396 aa6.45□□□□□ -1.38
HMGB1P49-201ENST00000418882 C9orf118A6NHY6 69 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 H0Y858 1186 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 CYP7B1O75881 506 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 PRLP01236 227 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 CYP1A1P04798 512 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 CHGBP05060 677 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZNF888P0CJ79 500 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 CSF2RBP32927 897 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 STAT3P40763 770 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 ID4P47928 161 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 RGS3P49796 1198 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 ALDH6A1Q02252 535 aaKnown RBP6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 NFATC3Q12968 1075 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 Q6ZUG5 572 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 FRMD5Q7Z6J6 570 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 LCORQ96JN0 433 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms