RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CCDC174Q6PII3 467 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.32
LIMK1-202ENST00000418310 ZNF713Q8N859 430 aaPredicted RBP13.02□□□□□ -0.32
LIMK1-202ENST00000418310 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.32
LIMK1-202ENST00000418310 CELF4Q9BZC1 486 aaKnown RBP13.02□□□□□ -0.32
LIMK1-202ENST00000418310 GANQ9H2C0 597 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 IGKV6D-41A0A0C4DH26 115 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 F5H6K3 240 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 EML1O00423 815 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 LRRN2O75325 713 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 AFPP02771 609 aaKnown RBP13.02□□□□□ -0.33
LIMK1-202ENST00000418310 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 KLRC3Q07444 240 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 DAAM2Q86T65 1068 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 PACS2Q86VP3 889 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
LIMK1-202ENST00000418310 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 ZNF233A6NK53 670 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 EBAG9O00559 213 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 PAK2Q13177 524 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 SEMA3FQ13275 785 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 EMBQ6PCB8 327 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 OSGEPQ9NPF4 335 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 AMACRQ9UHK6 382 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 SCAF8Q9UPN6 1271 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 NRAPQ86VF7 1730 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 NR3C1P04150 777 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 PON1P27169 355 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 HOXD13P35453 343 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 UBLCP1Q8WVY7 318 aaPredicted RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 IQCDQ96DY2 449 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 PLAAQ9Y263 795 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 TMEM110-MUSTN1A8MSY1 372 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 GH2P01242 217 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 PRLRP16471 622 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
LIMK1-202ENST00000418310 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 TDRD3Q9H7E2 651 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 PPANQ9NQ55 473 aaKnown RBP13.01□□□□□ -0.33
LIMK1-202ENST00000418310 SMIM23A6NLE4 172 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 SPATA31C1P0DKV0 1188 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ERVK-9P63128 1117 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 JAG1P78504 1218 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
LIMK1-202ENST00000418310 TTC31Q49AM3 519 aaPredicted RBP13□□□□□ -0.33
LIMK1-202ENST00000418310 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 INPP4AQ96PE3 977 aaPredicted RBP13□□□□□ -0.33
LIMK1-202ENST00000418310 KCNMB3Q9NPA1 279 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 NAGPAQ9UK23 515 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
LIMK1-202ENST00000418310 FAM169AQ9Y6X4 670 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 MSH4O15457 936 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 FAM13AO94988 1023 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 FLT3P36888 993 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 IRF2BP2Q7Z5L9 587 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 USP38Q8NB14 1042 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ERMNQ8TAM6 284 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 COA1Q9GZY4 146 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 GRIN2DO15399 1336 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 KRIT1O00522 736 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 EIF3HO15372 352 aaKnown RBP eCLIP13□□□□□ -0.33
LIMK1-202ENST00000418310 KIF4AO95239 1232 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 NDUFB10O96000 172 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 USP8P40818 1118 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 TNNC1P63316 161 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ODF2Q5BJF6 829 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
LIMK1-202ENST00000418310 METTL13Q8N6R0 699 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 UHMK1Q8TAS1 419 aaKnown RBP13□□□□□ -0.33
LIMK1-202ENST00000418310 NEUROG2Q9H2A3 272 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 SWAP70Q9UH65 585 aa13□□□□□ -0.33
LIMK1-202ENST00000418310 ABCB11O95342 1321 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 DAPK3O43293 454 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 TOM1O60784 492 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 GNA14O95837 355 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 EPB41P11171 864 aaKnown RBP12.99□□□□□ -0.33
LIMK1-202ENST00000418310 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-202ENST00000418310 ECE1P42892 770 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 EIF2AK1Q9BQI3 630 aaKnown RBP12.99□□□□□ -0.33
LIMK1-202ENST00000418310 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 TSPYL1Q9H0U9 437 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 NOC2LQ9Y3T9 749 aaKnown RBP12.99□□□□□ -0.33
LIMK1-202ENST00000418310 BTAF1O14981 1849 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms